| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4395 |
|---|
| Symbol | |
|---|
| ID | 5200362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4847268 |
|---|
| End bp | 4848401 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640583947 |
|---|
| Product | glucose sorbosone dehydrogenase |
|---|
| Protein accession | YP_001264871 |
|---|
| Protein GI | 148557289 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.82365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGTC CCCGTCCCGC CCTGTCCTTC GCCATCCTCC TCGCCGCAGC GACGGCCGCG
CCGGCGATCG CCGCGCAGGC GCCGATCACG GGGGGCCGGC CTTTCGCCGA CAAGCCGTTC
AAGGTGGAGG AGGTCGCGCG CTTCGACAGC CCCTGGGCGA TGACCTTCCT GCCGGGCGGC
CACATGCTGG TCACCGAGAA GGCGGGCCGG CTGCTGCTGC TGTCGCCCGA CGGCGCGCGG
CGCACTGCGG TCGAGGGCGT GCCCGCCGTC GATTCAAGCG GGCAGGGCGC GCTGGGCGAG
GTCGTCGCGC ATCCCGACTT CGCGACCAAC GGCCTGGTCT ATTTCAGCTA TTCGGCGCCG
GGATCGCCGA ACGGCATCGT GCTGGCGCGC GGCAAGCTGG TCGGCGACCT CGGCGGCGCG
CGGCTGGAGG GCGTGACGAC GCTCTATCGC GCCCATCCGC TCAAGAGCGG CGGCCATTAT
GCGGGGCGGA TCGCCTTCTC GCCCGACGGC CATCTCTTCT TCTCGATGGG CGAGCGGCAG
AAATTCACGC CGGCGCAGGA GCCCGACGGC GTCCTCGGCA AGGTCGTCCG CCTGACGATG
GACGGCCAGC CGGCGCCGGG CAATCCGCTG GCGGCGAAAG GGTTCGACCC GGCGGTCTGG
AGCTATGGGC ACCGCAATCC GTTGGGCCTG GCCTTCGACC TCGAAGGGCG GCTGTGGGAC
GCGGAGATGG GACCCAAGGG CGGTGACGAG GTCAACCTGA TCCTGCCGGG CCGCAACTAT
GGCTGGCCGA TCGTCTCCAA CGGCGACCAT TATGACGGCA AGCCGATCCC CGACCATGTG
ACCCGGCCCG AGTTCGAGGC CCCGAAGGTG AGCTGGAACC CGTCGATCTC GCCGTCGAGC
CTGCTGGTCT ATTCGGGCAA GCTCTTCCCC CAATGGCGCG GCAAGGCGCT GGTCGGCGCG
CTGTCGGGCG AGATGCTGAT CCTCGTCGAC CTGGGCGAGG AGGGCGCGAA GGAAGAGGCG
CGCTATGCGA TGGGCCAGCG CATCCGCGCG GTCGACCAGG GGCCCGACGG TGCGGTCTAT
GTGCTGGAGG ACAAGGCGGG CGGGCGATTG CTGCGGCTGA TGCCGGCGGG CTGA
|
|---|
| Protein sequence | MPRPRPALSF AILLAAATAA PAIAAQAPIT GGRPFADKPF KVEEVARFDS PWAMTFLPGG
HMLVTEKAGR LLLLSPDGAR RTAVEGVPAV DSSGQGALGE VVAHPDFATN GLVYFSYSAP
GSPNGIVLAR GKLVGDLGGA RLEGVTTLYR AHPLKSGGHY AGRIAFSPDG HLFFSMGERQ
KFTPAQEPDG VLGKVVRLTM DGQPAPGNPL AAKGFDPAVW SYGHRNPLGL AFDLEGRLWD
AEMGPKGGDE VNLILPGRNY GWPIVSNGDH YDGKPIPDHV TRPEFEAPKV SWNPSISPSS
LLVYSGKLFP QWRGKALVGA LSGEMLILVD LGEEGAKEEA RYAMGQRIRA VDQGPDGAVY
VLEDKAGGRL LRLMPAG
|
|---|
| |