Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4336 |
Symbol | |
ID | 5197802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4781896 |
End bp | 4783104 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640583890 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_001264814 |
Protein GI | 148557232 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR00581] molybdenum cofactor biosynthesis protein MoaC [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.834663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAG CCTTCATCTG CGACGCGGTG CGCACGCCGA TCGGCCGCTA TGGCGGCATC CTCTCCGGCG TCCGCGCCGA CGATCTCGGC GCGCTGCCGA TCCGCGCGCT GATCGAGCGC AATCCCGGCC TCGACCCCGC CTCGATCGAG GAGGTGTTCT ACGGCTGCGC CAACCAGTCG GGCGAGGACA ACCGCAACGT CGCGCGGATG AGCCTGCTGC TCGCCGGTCT GCCGACGGCG GTGCCGGGCG TCACCCTCAA CCGGCTGTGC GCGTCGGGGC TCGAGGCGGT GGGCGCCGCG GCGCGGGCGA TCCGCACCGG CGAGATGGAC CTCGCCGTCG CCGGCGGGGT CGAGAGCATG ACCCGCGCGC CGCTCGTCAT CGGCAAGGCC GGCGGCGCGT TCGGGCGCGA CCAGAAGCTC GAGGACACGA CGATGGGCTG GCGCTTCGTC AACCCCGCGC TCGATGCGCT GCACGGCACC GAGACGATGC CGCGCACCGC CGAGAACCTG GCCGAGGATC ACGGCATCAG CCGCGCCGAC CAGGACGCCT TCGCGCTGCG CAGCCAGCAG CGCGCCGTGG CGGCGCAGGC GAACGGCTTC CTCGCCGAGG AGATCATCGC CGTCACCGTG CCCGGCAGGC GCCGGGGCGA GACGTCGCAG GTCGATACCG ACGAGCACCC CCGCGCCGAC ACCACGCTGG ACACGCTCGC CAAGCTCAAG CCGCTGTTCG GCCCGGCCGG CACGGTGACG GCGGGCAACG CCTCGGGGAT CAACGACGGC GCGGCGGCGA TGATCGTCGC CGGCGAGGCC GCCGCCCGCG CGGCGGACCT CACCCCGCGC GCCCGGATAT TGGGCATGGC ATCGGCCGGC GTCGACCCGC GCGTGATGGG GATCGGCCCG GTGCCGGCGA CGCAAAAGCT GCTCGCCCGG CTCGGCCTGT CGATCGAGGC GTTCGACGCG ATCGAGCTCA ACGAGGCCTT CGCCAGCCAG TCGCTCGCCG TGCTGCGCGG ACTGGGCCTG CCCGACGACG CGCCGCAGGT GAATCCGAAC GGCGGCGCGA TCGCGCTCGG CCATCCGCTC GGCATGTCCG GCGCGCGGAT CGCGGCGTCG CTGGTCCACC AGCTCGAACG GACCGGCGGC AGGCTGGGCC TCGCCACGCT CTGCGTCGGG GTCGGCATGG GTCTCGCGCT CGCGGTCGAG CGGGTCTGA
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Protein sequence | MAEAFICDAV RTPIGRYGGI LSGVRADDLG ALPIRALIER NPGLDPASIE EVFYGCANQS GEDNRNVARM SLLLAGLPTA VPGVTLNRLC ASGLEAVGAA ARAIRTGEMD LAVAGGVESM TRAPLVIGKA GGAFGRDQKL EDTTMGWRFV NPALDALHGT ETMPRTAENL AEDHGISRAD QDAFALRSQQ RAVAAQANGF LAEEIIAVTV PGRRRGETSQ VDTDEHPRAD TTLDTLAKLK PLFGPAGTVT AGNASGINDG AAAMIVAGEA AARAADLTPR ARILGMASAG VDPRVMGIGP VPATQKLLAR LGLSIEAFDA IELNEAFASQ SLAVLRGLGL PDDAPQVNPN GGAIALGHPL GMSGARIAAS LVHQLERTGG RLGLATLCVG VGMGLALAVE RV
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