Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4212 |
Symbol | |
ID | 5199631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4640670 |
End bp | 4642139 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640583766 |
Product | succinate semialdehyde dehydrogenase |
Protein accession | YP_001264690 |
Protein GI | 148557108 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGG GGCTCGTCCT CGACGATCCG TCGCTGCTGG TCGAGCGCTG CCTGATCGGC GGTCGCTTCG TCGGCGATCC CGTGGAGCCG GTGGTCGATC CGGCCACCGG CCGCACGATC GCCCGGGTGC CGCGCCTCGG CGCCGAAGCG GCGACCGCCG CCGTCGAGCA GGCGCAGGCA GCCTTTCCCG CCTGGGCCGC GCGGACCGCG AAGGAGCGCG CGACGGTGCT GCGCGCCTGG TTCGAGCAGA TCCGGGCCCA TCGCGCCGAC CTTGCCCTGA TCCTCACCAG CGAGCAGGGC AAGCCGCTCG CCGAAGCGCT GGGCGAGATC GACTATGCCG CGGCCTTCGT CGAATATTAT GCCGAGGAGG CCAAGCGGGT CGCTGGCGAG ACCCTGGCGA GCCACCGCGC CGATGCGCGC ATCCTCGTCA CGCGGGAGCC GATAGGGGTG ATCGGCGCGA TCACGCCCTG GAACTTCCCG GCGGCGATGA TCACACGCAA GGTGGCGCCG GCCCTCGCCG TCGGCTGCAC CGCGCTGGTC AAGCCGGCGC CGGAGACGCC GTTGACCGCG TTGGCGCTCG GCGAGCTTGC GGTCCGGGCC GGGCTTCCGC CGGGGGTCCT CAACATCGTC ACCGGCGACG CGGCGGCGAT CGGCGCGGTG ATGACCGGCC ACCCCGCCGT GCGGGTGGTC AGCTTCACGG GCTCGACCGA GGTCGGCCGC CGGCTGATGG CGCAGGCCGC GCCGACGGTG AAGCGGGTGG CGCTCGAACT CGGCGGCAAC GCGCCCTTCA TCGTCTTCGA CGACGCCGAT CTCGATGCCG CGGTCGAAGG GGCGATCGCC GCCAAGTTCC GCAACATGGG GCAGACCTGC GTCTGCGCCA ACCGGCTCTA TGTCCAGGAC GCGGTCCACG ACGCCTTCGC GTCGCGGCTG GCAACGGCGA TCGAGAGCCT CCAGGTCGGG CCCGGCACCG AGCCCGGCGT CGCCCAGGGC CCCCTGATCA ACGCACGGGC GCTCGCCAAG GTCGAGGCGC ATGTCGCCGA TGCCGTCGCC GGCGGCGCCA CCGTAGCACT GGGCGGCCGG CGCCATCCGC GCGGCGGCAC CTTCTATGCG CCGACCCTGC TCATCGGCGC CACGCCGACG ATGCGGATCG CCCGCGAAGA GACGTTCGGC CCCGTCGCCG CGCTGTTCCG CTTCACCGAC GAGGAGGAGG TGATCGCCCA GGCCAATGCC AGCGAGACGG GCCTCGCCGC CTATGTCTAC ACCCGCGATC TCGGCCGCGC CTTCCGGGTC AGCGAGGCGC TCGAATATGG CATGGTCGGG TTGAATACGG GGCTGATCTC GACCGAGCTC GCGCCGTTCG GCGGCGTCAA GCAGAGCGGT CATTCCCGCG AGGGCTCGCA TCATGGCCTC GAGGATTATT GCACGCTCAA ATATGTCCTC GTCGCCGGGC TGCGGCGGGC GGGAGGATGA
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Protein sequence | MTEGLVLDDP SLLVERCLIG GRFVGDPVEP VVDPATGRTI ARVPRLGAEA ATAAVEQAQA AFPAWAARTA KERATVLRAW FEQIRAHRAD LALILTSEQG KPLAEALGEI DYAAAFVEYY AEEAKRVAGE TLASHRADAR ILVTREPIGV IGAITPWNFP AAMITRKVAP ALAVGCTALV KPAPETPLTA LALGELAVRA GLPPGVLNIV TGDAAAIGAV MTGHPAVRVV SFTGSTEVGR RLMAQAAPTV KRVALELGGN APFIVFDDAD LDAAVEGAIA AKFRNMGQTC VCANRLYVQD AVHDAFASRL ATAIESLQVG PGTEPGVAQG PLINARALAK VEAHVADAVA GGATVALGGR RHPRGGTFYA PTLLIGATPT MRIAREETFG PVAALFRFTD EEEVIAQANA SETGLAAYVY TRDLGRAFRV SEALEYGMVG LNTGLISTEL APFGGVKQSG HSREGSHHGL EDYCTLKYVL VAGLRRAGG
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