| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4194 |
|---|
| Symbol | |
|---|
| ID | 5198717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4615068 |
|---|
| End bp | 4616288 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640583748 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001264672 |
|---|
| Protein GI | 148557090 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.268221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0453774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGA TATTGCACAA CGGCCCGATC TTCGACGGGC ACTCCGCCGA CCTGTTGCAG
GGACAGGCCA TCTATGTCGA AGACGGGCTG ATCCGCGAAA TCGCGCCGCT CGACAAGCTT
CCGGGCGCGG AACGGCGGAT CGACCTGAAC GGGCATTTCG TGATGCCCGG CCTGATCGAC
GCCCATTTCC ACGCCTATGG GATCGAGGTC GACCTCGAAA AGGTCGACCA CATCTCCCCC
GCCCTGCGCA GCCTCCATGC CCGGCGCTTC CTGGAAAGCG CGCTGCACCG CGGCTTCACC
ACCGTGCGCG ATGCCGCCGG CGGCGATCTG CCGCTGGCGA CCGCCCTCGA ACAGGGCCTG
ATCGACGGGC CGCGCTTCTT CTTTCCCGGC CTCGCCATCA GCCAGACCGG CGGGCATGGC
GATTTCCGCC TGCCCGACCA TTATGACGCC TGCGCCTGCG CTTATTGCGG GGCGCTGGCG
ACCGTCGCCG ACGGCCCCGA CGAGGTGCGC CGGGTCGTGC GCGATCAGCT CCGCAAGGGC
GCGCACCACA TCAAGCTGTT CGTGTCCGGC GGCGTGCTGT CGCGCACCGA CCCGATCTGG
ATGCGGCAGT TCAGCGACGC CGAGATCCGG GTCGCGGTCG AAGAGGCCGA GACGCGCCGC
GCCTATGTCA TGGCGCATGT CCATACCAAT GAGGCGGCGC TGCGCTGCGT CGCCAACGGC
GTCCGTTCGC TGGAGCACGT CACCATCCTC GAGCGGGATG GGGCCGACGC CATCGTCGCC
GCCGGCGCTT TCGCCGTGCC GACCTTCGCC ATCGGCGACG CGATGAAGGA ACGCGCCGAG
CAGATGGGAT TGCCCGCGGC GATCCTCGAC AAGGTCCGCG CGATGGGCGA CGTGGCCTAT
GCGTCGCTGG ACCATCTGCG ACAGGCCGGG GCCCAGATCG GTTTCGGCAC CGACCTGCTG
GGCCCGCTGA TGGATCGCCA GGCCCGCGAG TTCCGCTTGC GGCTGCCCGT CTGCAGTCCG
GTCGAGATCC TGCGATCGGC GACCTCGGTC AACGCCGCGC TGCTTCAGAT GGAAGGCAAG
TTGGGGACGA TCGCGCCCGG CGCCTGCGCG GACATCATCG CCATCGACGG CAATCCGCTG
GACGACATCG CCCTGTTCGA ACAGCAGGAG CGCATCGGCT TCATCATGCG CGACGGCAAG
GTCGTCCGAT GCGCGCTTTA G
|
|---|
| Protein sequence | MSAILHNGPI FDGHSADLLQ GQAIYVEDGL IREIAPLDKL PGAERRIDLN GHFVMPGLID
AHFHAYGIEV DLEKVDHISP ALRSLHARRF LESALHRGFT TVRDAAGGDL PLATALEQGL
IDGPRFFFPG LAISQTGGHG DFRLPDHYDA CACAYCGALA TVADGPDEVR RVVRDQLRKG
AHHIKLFVSG GVLSRTDPIW MRQFSDAEIR VAVEEAETRR AYVMAHVHTN EAALRCVANG
VRSLEHVTIL ERDGADAIVA AGAFAVPTFA IGDAMKERAE QMGLPAAILD KVRAMGDVAY
ASLDHLRQAG AQIGFGTDLL GPLMDRQARE FRLRLPVCSP VEILRSATSV NAALLQMEGK
LGTIAPGACA DIIAIDGNPL DDIALFEQQE RIGFIMRDGK VVRCAL
|
|---|
| |