| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4174 |
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| Symbol | |
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| ID | 5196537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4592953 |
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| End bp | 4594275 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640583728 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001264652 |
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| Protein GI | 148557070 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000409814 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0305498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGGCG TGGGCGATGG CCTTCGGATA GACCGGTTGA TAGAGGCGGA CCGGGTGCAT
CGGACAGTTT ACACCGATGA CATGATCTTC AGGCGTGAAA TCAAGCATAT CTTCGGACGG
AGCTGGCTCT TCGTCGGTCA TGAAAGCCAG GTCCCCGAAC CCGGCAGCTA TTTCACGACG
AGGCTCGCCG GTCAGCCGAT GGTGATGGTT CGGCAGCGGG ACGGGAGCAT CAAGGTGCTC
CACAACCGTT GCGGGCACAG GGGCGCTCTC GTGGTGAACG CCCGGATGGG CAAGGCGCAC
AAGTTCAACT GCATCTATCA CGGATGGACG TTCGACACCG ATGGCTGCCT TCTGCACGTG
CCTCTCGAGA GCGGATATGA AGGCACGCGG TTCGATATTT GCGACCCGCA GTTTGGCATG
CCGGCGGCGG CGACCGAAAC CTACAAGGGG TTCGTCTTCG CACGGCTCGC TGGCGATGGT
CCGGGACTGG TCGATTTCCT GGGTGGCGCC CGCGAGGTCA TCGACCATCT GCTCGAATTG
TCACCGACCG GCCGCATCGA AGTCCGGGGG AACAGCTTCC GATCGATATA TCCCTGCAAC
TGGAAGATCT ATCTCGAGAA TCTTCACGAT GGCGTGCACC CCAAGTTCGT CCACACCTCA
TCGGTAGTGG CGAGCACGGA AGTCCGTTCC GGCCTGAAGA GTTCGGCAAG CGGGACCGAG
GACGACGACT TCGTCCTGGG CGTGATCGCC GCCAACGGGC AGTCGTTCGG CGACATGGAC
AAGCTGCAGG TCAATGCCTA CCCCAACGGG CACAGCAGCA TGCGGGGTTT CCGGGAAGCG
GTGACGCGAT CCGGCCCCTT CGAGACATTG CGGAAGGAAC TCGCGGAACG GCACGGGGCT
GAAAAGAGCG ACGAGATTCT GGCGCGGAAC TGGCACAATA TGTGCGTCTA TCCGAATCTG
TCGATGCATC CGGGCTTCCT GCAACTCCGC ACCCTCACGC CGCTGTCGAC GGACAGGACG
ATGGTCGAAG TATGGTGCAT GCGGCTGGTG GGCGCCCCCG ACGAGATCTA TCGGCGCGCC
GTCATGTACG CCAATACCGT GCACGCGCCC TCTTCGGTGA TCAAGCCGGA TGACCTCGAA
GCCTATCAGC GGGTCCAGGC CGGCTTGCAG ACCGACAGTG CGCAGTGGGT CAGCAACCAT
CGCCGGGCGG GCCGCGAAGA GATTGGCGAG GGCGTGAAGA CCGATTCCGC GCTGAGCGAG
CATTTCATCC GGAATCAGTA TCAAGCCTGG GCGCACTACA TGTCGGAGAC GAATGATGCA
TGA
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| Protein sequence | MPGVGDGLRI DRLIEADRVH RTVYTDDMIF RREIKHIFGR SWLFVGHESQ VPEPGSYFTT
RLAGQPMVMV RQRDGSIKVL HNRCGHRGAL VVNARMGKAH KFNCIYHGWT FDTDGCLLHV
PLESGYEGTR FDICDPQFGM PAAATETYKG FVFARLAGDG PGLVDFLGGA REVIDHLLEL
SPTGRIEVRG NSFRSIYPCN WKIYLENLHD GVHPKFVHTS SVVASTEVRS GLKSSASGTE
DDDFVLGVIA ANGQSFGDMD KLQVNAYPNG HSSMRGFREA VTRSGPFETL RKELAERHGA
EKSDEILARN WHNMCVYPNL SMHPGFLQLR TLTPLSTDRT MVEVWCMRLV GAPDEIYRRA
VMYANTVHAP SSVIKPDDLE AYQRVQAGLQ TDSAQWVSNH RRAGREEIGE GVKTDSALSE
HFIRNQYQAW AHYMSETNDA
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