| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4173 |
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| Symbol | |
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| ID | 5196536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4590627 |
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| End bp | 4592918 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640583727 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264651 |
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| Protein GI | 148557069 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000121747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.086797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGTC TAATTCTTCT GACTGGAGTG TCGATCATTG CCGTCCACGC CAGCACCGCT
ATGGCGCAAG CCACGGGCAC GGACGTGGGG GCCGATGACC GGCTTTCCGA AATCGTCGTT
ACCGCGGATC GCAACGAGCG GTCGCTGCAG GATGTCCCGA TCAGCATCAG CGCGTTCAGC
GCCCAGGCGC TGGAAAAAAG CAATGTCACC GAAGCCAAGG ATTATCTGCA ATTTGCGCCG
AACATCGTCT TCACCGAAGA CGGCGCGACG GGGCCGCGCA GCATCGACGT GGCCATTCGC
GGCGTCGGCA ATATCAAGTC GTCCGATCTT GTCACGACGA GTTCGGCCAT CGGCTATTAC
ATCGACGAGC TGAACGTCGG CGCCGTGGCC AATGGAACCA TCAATCCCCA GATGCTGGAC
GTTGAGCGGA TAGAAGTCCT TCGTGGTCCG CAAGGCACGT ATTTTGGGCG CAATTCGCTC
GGCGGCGCCG TGAGCATCAA TACGGTCCGG CCGAAGGACC GCTTCGAGGC TGAGGTCTCC
GGCTCCTACG GAAGCTTCGA TACCTGGGAC TTCCGCGGTA TCCTGAACGT CCCGCTGGCG
GAGGGCCTCT ATGTTCGTGG CGCCTATCTT CACAGCGAAA GCGGCGGAGT CGTAAAGAAC
GTCAATCCCA ACGGCGCTCC CGACAGCGGC TATGTCGACA ACACCGCGCG CTTTGCCCTG
CGAGCGGAGC CGGGCTCGGG GCTGACCATT GACGCGTCGC TGAGCTACAC CCGCGAAAAT
GCCGGCCTGG ACGACACGGT GCCTTCGGGT GTTATCGACA ACGATACGAA GCAGACCCTC
GGCAATGCCA ATCTCATGCC GATTTCCCAA GGGTTGGGCT TTTATCCCGA GAACCAGCGC
CTCGTAAATC ACAACGCCCC GGAATATAAC CGCAATCGGT TCCTCATCGC CAATATGCGC
GTTAAATATG AAGGCGAGCT TGTCGACCTG TCTTCCGTGA CCGGTTATCT ATACAGCCGT
AATTCGCGAC TATTCGATCA GGACAATATC AGCGCGGATA TTTTCAATCG CGTGGTCAAG
GGCCATACGA AATCCTACAG TCAGGAACTC CGTATCGCAT CGAAGCCGGG CAGTTCGTTC
AAATGGACGT TCGGAGGGCT GGCGGCTCGG GACTATCTCG AACAGTTCTC GAACGTCTAT
GTGGGATCGG CGCGGACCTA TACCGATCCG CTCACCGGCG TGACCACCCG ATATCTGCCG
GATCGCTTTC CGGACGGTTT CCCGCTCAAC CAGCGTAACC GGACGAGCAA GGTCAACAGC
TATGCGGTGT TCGGCGAAGG CGTGTACCGC CTCGGCCGAG TCTCGTTCAC GCTGGGCGCG
CGATATACCC GCGACAAAGT GCAGGCGACC CAGTTCGGCG TTCTTGCTTC GAACGTGCCG
TTGCCCGATG CGGGGGCCAG CAGCAGCTTC AACGACTTCT CCCCCCGACT GGTCGTCAAC
TACGACGTGA ATGACGACGT CCACCTCTAC ACCTCCGTTT CGAGCGGGTA CAAAGCAGGC
GGGGTCGATA TCAACCGCAG CGTCGTCCGC GCCTTCAAAC CGGAAAAGCT CTGGAGCTAT
GAGGCGGGGT TCAAGACCCA GCTTCTCGAT CGCCGGCTCA GGGTCAACGG CGCGCTCTAC
TATCTCGACT GGAAGAACAT CCAGGTCGTG AGCGCATTTC TCGCCGACCC GAACGACATC
AGTTCGAGCA CCCAACTCAC GCTCAATGCT TCGAAAGCCA CGAGCAAGGG CGCCGAACTC
GAAGTGCAGG CCTTGCCGAT GCGGGGGCTG CAACTGGGAT TGAACGCCGG ATATCTGGAC
GCGAAATTCG GCGCCTTTCC CGACGCCGTG GTGTTCGGTG GCGGGCAGTT CGACCTGACC
GGAAAGCGTG TGCCGAAATC GCCGAAATGG AACCTGAGCG GAAATGCGGA ATATGGCTTC
GACCTGACCT CGTCCGCCGA TGCCTATGTT CGAGCGGAAG CCGTGTATCG CAGTTCGCTG
GAGGGCAATC TCGATGCGAC GGCGGCACCG CTCCAGGGCC TTGCTCCCTT TCCCTACCTC
TCCCCCTCCT ACACCGTCGT GAATGTGCGT GCCGGTCTGA ATGCCGGCCC TATCAGTGCG
CAGGTCTTTG TGGAGAACCT CTTCAAGAAG GATTATTTCA GCGGCACTTA TGACCATTTC
GGCCTGGCCG GCATTCGGCT GAAGCCACAC CCCCGCTTGT GGGGATTGCG CCTCACATGG
AAAACCAACT GA
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| Protein sequence | MVRLILLTGV SIIAVHASTA MAQATGTDVG ADDRLSEIVV TADRNERSLQ DVPISISAFS
AQALEKSNVT EAKDYLQFAP NIVFTEDGAT GPRSIDVAIR GVGNIKSSDL VTTSSAIGYY
IDELNVGAVA NGTINPQMLD VERIEVLRGP QGTYFGRNSL GGAVSINTVR PKDRFEAEVS
GSYGSFDTWD FRGILNVPLA EGLYVRGAYL HSESGGVVKN VNPNGAPDSG YVDNTARFAL
RAEPGSGLTI DASLSYTREN AGLDDTVPSG VIDNDTKQTL GNANLMPISQ GLGFYPENQR
LVNHNAPEYN RNRFLIANMR VKYEGELVDL SSVTGYLYSR NSRLFDQDNI SADIFNRVVK
GHTKSYSQEL RIASKPGSSF KWTFGGLAAR DYLEQFSNVY VGSARTYTDP LTGVTTRYLP
DRFPDGFPLN QRNRTSKVNS YAVFGEGVYR LGRVSFTLGA RYTRDKVQAT QFGVLASNVP
LPDAGASSSF NDFSPRLVVN YDVNDDVHLY TSVSSGYKAG GVDINRSVVR AFKPEKLWSY
EAGFKTQLLD RRLRVNGALY YLDWKNIQVV SAFLADPNDI SSSTQLTLNA SKATSKGAEL
EVQALPMRGL QLGLNAGYLD AKFGAFPDAV VFGGGQFDLT GKRVPKSPKW NLSGNAEYGF
DLTSSADAYV RAEAVYRSSL EGNLDATAAP LQGLAPFPYL SPSYTVVNVR AGLNAGPISA
QVFVENLFKK DYFSGTYDHF GLAGIRLKPH PRLWGLRLTW KTN
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