| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4167 |
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| Symbol | |
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| ID | 5199980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4583186 |
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| End bp | 4584490 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583721 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001264645 |
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| Protein GI | 148557063 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.130001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.207789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGC CCTTGACCTC ATCGAATGAC GCCCTCTGGG GCCGGCGGTT GGCGGCGGTG
CCGCAGGGCG TCGCCACCGC CGCACCGATC TTCGCCGCGC GAGCGGAGAA TGCGGAAATC
TGGGACGTCG AAGGGCGGCG TTACATCGAT TTCGCGTCCG GCATCGCGGT GCTCAACGTC
GGCCATCGCC ATCCGCGGAT CATCGCCGCG GTGGAGGAAC AGCTCGGCCG CTTCACCCAC
ACCGCCTTCC AGGTCGTCGG CTACGAGCCC TATGTCCGGC TGGCCGAGCG GCTGAATGCG
TTGGCGCCGG TCGTCGGCCC CGCGAAGACG ATCTTCTTCA CCACCGGCGC CGAGGCGACC
GAGAATGCGG TGAAGATCGC GCGCTATGCC AGCGGCCGCA GCGCGGTGAT CGCCTTCGTC
AACGGCTTCC ACGGGCGCAC CTTGCTCGCG TCGGCGATGA CCGGGAAGGT CCTGCCCTAC
AAGAAGGGCT TCGGCCCCCT GCCCGGCGAT ATCTACCACA TCCCCTTTCC CAGCGAGGCG
CACGGTATCA CGGTCGAGCA TAGCCTCGCT GCGCTCGCCA ACGTGCTCAG CTCGGATGTC
GAGGCGGCCA ATGTCGCCGC GATCATCCTC GAGCCCGTAC AGGGCGAAGG CGGCTTCCAT
GTCGCGCCGT TCGAATTCCT GCGCGCGCTG CGCAGCCTGT GCGACGAGCA TGGCATCGCC
CTGATCGCCG ACGAGGTGCA GACCGGCATC GGCCGCACCG GCAAGCTGTT CGCGGTCGAA
CATGCCGGGG TCCGGCCCGA CCTGATCACC GTCGCCAAGT CGCTCGGCGG CGGCTTCCCG
CTGTCGGCCG TGGTCGGCAA TGCCGCGCTG ATCGACCGGG TGCCGCCCGG CGGCCTGGGC
GGCACCTATG CCGGCTCGCC GATCGCCTGC GCCGCCGGGC TCGCCGTGCT CGACGTGATC
GAGCAGGACC GGCTGTGCGA CCGCGCCGAG CGGATGGGAC GGCGGATCAC CGAGCGGTTG
AGCGCCGTCG CCGCCCGCCG CGAGCTGCCG ATCGGCCTGC CGCGCGGCCT GGGCGCGATG
ATCGCCTTCG ACATCCGCGC CGGGTTGGAT GACCTTCGTC CCGACGGCGC CGCCGCGAAA
CGGGTCTGCG TCCGTGCACT GGAGCTCGGC TTGATCCTGC TGACCTGCGG CCAGCATGGC
GAGGCGATCC GCCTGCTGGC ACCGCTGACC GCGTCCGATG CCGTGCTCGA CGAAGGGCTC
GACATCCTCG CGCAGGCGCT GGCCGACACG CTGGGCACCG CATGA
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| Protein sequence | MSKPLTSSND ALWGRRLAAV PQGVATAAPI FAARAENAEI WDVEGRRYID FASGIAVLNV
GHRHPRIIAA VEEQLGRFTH TAFQVVGYEP YVRLAERLNA LAPVVGPAKT IFFTTGAEAT
ENAVKIARYA SGRSAVIAFV NGFHGRTLLA SAMTGKVLPY KKGFGPLPGD IYHIPFPSEA
HGITVEHSLA ALANVLSSDV EAANVAAIIL EPVQGEGGFH VAPFEFLRAL RSLCDEHGIA
LIADEVQTGI GRTGKLFAVE HAGVRPDLIT VAKSLGGGFP LSAVVGNAAL IDRVPPGGLG
GTYAGSPIAC AAGLAVLDVI EQDRLCDRAE RMGRRITERL SAVAARRELP IGLPRGLGAM
IAFDIRAGLD DLRPDGAAAK RVCVRALELG LILLTCGQHG EAIRLLAPLT ASDAVLDEGL
DILAQALADT LGTA
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