Gene Swit_4132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4132 
Symbol 
ID5196491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4538099 
End bp4539595 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content66% 
IMG OID640583687 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001264611 
Protein GI148557029 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.291168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGG TACGCGAGGT CATCGAACGC GGCCGGTCCG CGAAGCTCAA GGGCGATCGC 
CGGATCGCGA TCATCGGCGC CGGCATCGGC GGCATCGCCA TGGCCTATGC GCTGGAGCAG
GCCGGCATCT CCGACTTCAC CATCTACGAG AAGGCGTCGT CGGTCGGCGG GACATGGCGG
GAGAATGTCT ATCCGGGTGT CGCCTGCGAC ATCCCGTCCC ATGCCTATTC CTTCACCTTC
GCGCTGAATC CCGAGTGGAG CCAGTCCTTC GCACCGGGGG AGGAGATCCG GCAATATCTG
GAGAACACCT GCCGGCAGCT CGACCTCAAC TGGCGGATCA GGTTCGGCAA GGAAGTCGTC
TCGGCGCGCT ACCGCGATGA CGGCTGGCAT CTGGAGATGG CCGATGGCGA CAGCGCCGTG
GTCGATGCCG TGATCGCCTG CACCGGCTTC CTGCACGTCG CCAACGAGAT CGGCCTGCCT
GGCATCGAGC GGTTCGAGGG GGAGGTGCTG CACAGCGCCA AATGGCGGCC CGATACCGAC
CTGCGCGACA AGAGGGTCGC GCTGGTCGGA TCGGGGTCCA CCGCCGCCCA GATCATCCCG
GCGATCGTCG ACCAGGTCGG CGGCCTGACG ATATTCCAGC GGACGGCGCA GTGGGTCTTC
CCGATCACGC GGGAACGGCA TTCGGACGAG CAGAAGCGCC GCCTGCGCGG CGATGTCGCG
CGGCTCTACG AGATATATGA CCGCATCATC GCCGAGAGCC AGCGGGACCT CGGCGCGCTG
TCCGCCGGCG ATCCCGAGAC GACCCGACGC TATTTCGAGG AGTGCAGCAA CAATCTGGCC
TTGGTCGAGG ACGCCGGGCT GCGGGCGAAG CTGACCCCCG ACTACCAGAT GATGTGCAAG
CGGCTGGTGA TGACGGAGGG CTTCTACGAG GCCGTCCAGC AGCCCCATTG CGACCTCGTC
ACCAGCCCGA TCGAGCGGAT CGAGCCCCAT GCCGTCCGCA CCGCCGACGG CGCGGCGCAC
GCGGTCGACG CCATCGTCCT GGCGACGGGG TTCAAGACCA AGGAATATTT CCGTTCGATC
AATCCAGTCG GGATCGACGG GATCACCCTC GACCAGGCCT GGGCCGACGG CATCTCGTCC
TTCGCGACGG TTTCCTTCGC GGGCTTCCCC AATCTCTTCG CGATCGGCGG ACCCTTCTCG
GCGCTCGGCA ACCAGTCCTA CATAACCGGC GCCGAACTGC AGACCGGCTA CATCATCCGC
CTGCTGAAGA TGCTGGAGGA CAGCGGTGCC CGCGCGCTGG CGCCCCGCCC GGAGGCCGAG
CAGCGGTTCA AGGCGGAGAA TGCCGCGGCG GCGCAGGGCA CCGTCTGGCT TTCCGGCTGT
AAGAGCTGGT TCCTCGACGA GAACAACAAC TTCCAGTTCT GGACCCGCAG CCCCGACGCC
TATGTCGAGA TGATGGATGA AGGGCCCCGA CGGGCCGATT TCCAACTGTT TTTCTGA
 
Protein sequence
MATVREVIER GRSAKLKGDR RIAIIGAGIG GIAMAYALEQ AGISDFTIYE KASSVGGTWR 
ENVYPGVACD IPSHAYSFTF ALNPEWSQSF APGEEIRQYL ENTCRQLDLN WRIRFGKEVV
SARYRDDGWH LEMADGDSAV VDAVIACTGF LHVANEIGLP GIERFEGEVL HSAKWRPDTD
LRDKRVALVG SGSTAAQIIP AIVDQVGGLT IFQRTAQWVF PITRERHSDE QKRRLRGDVA
RLYEIYDRII AESQRDLGAL SAGDPETTRR YFEECSNNLA LVEDAGLRAK LTPDYQMMCK
RLVMTEGFYE AVQQPHCDLV TSPIERIEPH AVRTADGAAH AVDAIVLATG FKTKEYFRSI
NPVGIDGITL DQAWADGISS FATVSFAGFP NLFAIGGPFS ALGNQSYITG AELQTGYIIR
LLKMLEDSGA RALAPRPEAE QRFKAENAAA AQGTVWLSGC KSWFLDENNN FQFWTRSPDA
YVEMMDEGPR RADFQLFF