Gene Swit_4033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4033 
Symbol 
ID5198830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4436363 
End bp4437484 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content72% 
IMG OID640583590 
Productchromosome partitioning ATPase 
Protein accessionYP_001264515 
Protein GI148556933 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family
[TIGR03018] exopolysaccharide/PEPCTERM locus tyrosine autokinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0871014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.899409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAC AGGACGATAG CGGCAAGCCG CCGCCCCGGA AGCGGAAGCG CGGCGGCTCG 
CTGATCGAGC GGGCGGGCTC GGTCTACGAC TTCGAAGCGG TGCTGCGCGC CCGCGTCGTC
ATGCCCGACG GCGGCGGCGA ACGGCCGGTG ATCGACCTGC CGCCGATCCC GCCGCAGCCC
TCCGTGCCGC TGGAGCCCCT CCAGCCGGCG GCGCAGCCGC TGCCCTATCA GGGGCTCGAT
GCCGGGACGG AGGTCGCCGC GGCCGACCCG ACCCTGCCCT TGGCCCCGCC GCCGACCCTC
GCCGATGCGG GGGGCGGGGC GCTGGTGCCG CCCGCCCCGC CGCCGGTCGC GGCCGCCGGC
GCCGACGCCG CGCTGCCCGC GCCCGAGATC GTCTATCGCA CCGCCAAGGT GAATCGCGCC
GACCTGATCG ACCAGGGCTT CGTGATGCCC GACGCGGCGA TCACCGCGCT CGCCGAGGAA
TTCCGCATCG TCAAGCGGAC GCTGCTGCTC AACGCGATCG GGCCGACCGC GCTGCCCAAC
GGGCGCCGCA TCCTGATCTG CTCGGCGCAG GCGAACGAGG GCAAGACCTT CTGCGCGGTC
AACCTGGCGC TGTCGATGGC GAACGAGCGC GACATCGAGG TGCTGCTGAT CGACGGCGAC
TTCGCCAAGC CGACCGTGCT GTCGACGCTG GGCATCGAGG GACCGGTGGG GCTGATGGAC
GCGCTCGCCG ATCCCGATAT CGATGTCGAG ACGCTGGTGA TCAAGACCGA CGTCGGCAAC
CTGTCGGTGC TGCCGTCGGG CAAATATACC AACGAGGCGA CCGAGCTGAT CGCCGCCGAC
CGGACCCGCG CGATCATCGA GCGGCTGTCG GCCCGGTCCA ACCGCATCAT CCTGTTCGAC
AGCCCGCCCG CGCTGGCGGC GTCGCCCGCG TCGGTGCTGG CCTATCATGT CGGCCAGGTG
CTGCTCGTCG TCCGCGCCGA CAAGACCGCG GAGGCGGAGC TGCGCGACGC GGTGCTGCTG
CTCGGCGGCT GCGAGGAGAT CCAGCTCCTC CTCAACGGCG CGCGCTTCGC ACCGAACGCC
CGCCGCTTCG GCAGCTATTA CGGATATGAA GCGCCGCGAT GA
 
Protein sequence
MDGQDDSGKP PPRKRKRGGS LIERAGSVYD FEAVLRARVV MPDGGGERPV IDLPPIPPQP 
SVPLEPLQPA AQPLPYQGLD AGTEVAAADP TLPLAPPPTL ADAGGGALVP PAPPPVAAAG
ADAALPAPEI VYRTAKVNRA DLIDQGFVMP DAAITALAEE FRIVKRTLLL NAIGPTALPN
GRRILICSAQ ANEGKTFCAV NLALSMANER DIEVLLIDGD FAKPTVLSTL GIEGPVGLMD
ALADPDIDVE TLVIKTDVGN LSVLPSGKYT NEATELIAAD RTRAIIERLS ARSNRIILFD
SPPALAASPA SVLAYHVGQV LLVVRADKTA EAELRDAVLL LGGCEEIQLL LNGARFAPNA
RRFGSYYGYE APR