| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4025 |
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| Symbol | |
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| ID | 5198638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4426789 |
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| End bp | 4429269 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583583 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001264508 |
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| Protein GI | 148556926 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCT CCGACAACCG CCCGACGGCC GGCTCGCCTG CGCCCGCATT CCTGGCGCTC
GGCTGCATCG GCTTCATCGC TTCGGCACCC GCGCTGGCGC AGGACGCACA GCCGGCCAAT
GGCGAGAAGC GGCTCGGCGG CATGACCGTG ACCGACACCG CGATCGACGA GGAAGGCTAC
AAGGCCGAGC GGGTCGAGAG CCCCAAGGCG GTGGCGCCGC TGCTCGACAC GCCGCGTTCG
ATCGTCGTGG TCGACAAGCA GGTGATCAAG GACACCGGAT CGGCGACGCT GGTCGAGGCG
CTGCGCACCG TCCCCGGCAT CACCTTCGGC GCGGCCGAGG GCGGCAATCC GATCGGCGAC
CGTCCGTTCA TCCGTGGCTT CGACAGCCAG GGCTCGACCT ATCTCGACGG CGTCCGCGAC
ATCGGCGCGC AGACCCGCGA GGTGTTCGCG ATCGAGCAGA TCCAGGTGGT GCGCGGATCG
GATTCGACGC TGGGCGGCCG CGGCAGCGCC GGCGGCTCGC TCAACATCGT CTCGAAGCTG
CCGCAGGAGG AGACCTTCTT CGCCGGTTCG GGCAGCTACG GCACCGACGA CTACAAGCGC
GTGACCGGCG ACGTGAACGT GCGGCTGTCG GACAAGGTGG CCTTCCGCCT CAACGCGATG
TGGCACGACC AGGACGTCGC CGGCCGCGAC GCGATCTACC AGAAGCGCTG GGGCGTCGCG
CCGTCGGTCA CGATCGGCAT GGACGGGCCG ACCAAGCTGA CGCTGGCCTA TTACCACCTC
GACACCGACG AGCTGCCCGA CAGCGGCATC CCCTTCCTCT ACACCTGCTC GACGACGCTG
TGTAACGCGC CCGCGGGCAA TGTGATCACC GCCCCGGCGC TCGGCGACAT CACCACCGCC
AGCGGCGTCA CCGGCCATGT CGGCCGCGAC ACCTTCTACG GCCTCAAGAG CCGCGACTTC
CGCGACAGCA AGACCGACCA GGCGACGATC CGCGCCGAGC ACGACTTCGG TTCCGTCACG
CTGCGCCACA CCGCGCGCTT CAGCCATAGC TCGCAGGCCT ACAGCTTCCT GCTGCCCGAC
GATTCGACCG GCAACGTGTT CGGTAATCCC GCCAACCTGG CACAGCAGCC CGGCGGCCAG
GTCTGGCGGC GCGCCAACAC CCGCTTCGGC TACACCGACA GCTTCATCAA CCAGACCGAC
CTCTACGGCA CCTTCGAGAC CGGATCGATC AAGCACAGCT TCGCGATCGG CGCGGAGCTG
TCGTCGGAGA AGGCCGAGCG CGGCGCCTTC GTGCTGGCGA CCGGATCGAC GATCAGCCCG
CGCTGCTCGG CGCTCGCCAT CGCGCGCTAT TACTGCGCCA GCCTGTTCAA TCCGAACCCC
AACGATCCGT GGATCAACTA TTCGAACGAC ACCGCCACCG GCGTCCCGAC CCCGATCACC
CGCGCCGCGC CGAGCGCGCG GACGCAGAAC GAGGCCAACA CCAAGGCGGT CTACGCGTTC
GACTCGATCA CGCTGACCGA ACAGCTCATC CTCAACCTCG GCGCGCGCTA TGACCGCTTC
CGCACCACCT CGACGCTGCC GCTGACCGGC GGTACCCGTC CGGTGGTCCG CCGCGTCGAC
AACATCTTCA ACTGGCAGGC CGGCCTGATC TTCAAGCCGA CGCCGAACAC CAGCCTCTAT
GCCTCCTACG CGACCGCCGC GACCCCGCCG AACAGCCTGC TGGGCGAAGG CCAGGAGCAG
AACGCGCTCA ACGCCGTCCA GGCGGCGAGC GACGCGCTAC GCGTCGAGAA GACCAAGTCG
TTCGAGATCG GCGCCAAGGC CGACCTGTTC GGCGGCGGCC TGTCGCTGAC CGGCGCGGTG
TTCCAGACCA AGACCAAGAA TGCCCGCGTC ACCAGCGACG CCAACACCGT CGCCTTCATC
GGAGAGCGGC GCATCCGCGG CGTCGAACTG GGCTTCAACG GCAACATCAC CGACGAATGG
AGCGTGTTCG GCGGCTACAC CTATCTCGAC GCCAAGATCG TCGACGGTGG CTTCTCGACG
CTGACCGCTG CGGCCGTCGG AAGCCAGGCG GCCAAGACCG TGCTCGTCCA GTCGGTCAAC
ACCGGCAAGC AGTTCCCGCA GACCGCGAAG CACACCTTCA CGCTGTGGAC CAACTACAAG
GTCACCGACG CGCTCTCGAT CGGCGGCGGC GCCTTCTATT CGAGCCGGGT CTATGGCGGC
TATGCCGACA ACCGCAAGGC GGTCCAGGAC GCGGCCGGCG TCGTGACGAT CGTGCCGGCC
ACCACCACGC TGGCGCGCGC CGTGCCGAGC TATTGGCGCT TCGATGCCCG GGTCGGCTAC
AAGGTCAGCG AGGCCATCGA CCTGTCGGTG AACGTGCAGA ACCTGACCAA CAAGACCTAT
TTCAACCAGG TCTACAGTTC GCATTACGCC TCGATCGCGC CGGGCCGCTC GGCCTTCGCG
ACGCTCAGCT TCAAATATTG A
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| Protein sequence | MARSDNRPTA GSPAPAFLAL GCIGFIASAP ALAQDAQPAN GEKRLGGMTV TDTAIDEEGY
KAERVESPKA VAPLLDTPRS IVVVDKQVIK DTGSATLVEA LRTVPGITFG AAEGGNPIGD
RPFIRGFDSQ GSTYLDGVRD IGAQTREVFA IEQIQVVRGS DSTLGGRGSA GGSLNIVSKL
PQEETFFAGS GSYGTDDYKR VTGDVNVRLS DKVAFRLNAM WHDQDVAGRD AIYQKRWGVA
PSVTIGMDGP TKLTLAYYHL DTDELPDSGI PFLYTCSTTL CNAPAGNVIT APALGDITTA
SGVTGHVGRD TFYGLKSRDF RDSKTDQATI RAEHDFGSVT LRHTARFSHS SQAYSFLLPD
DSTGNVFGNP ANLAQQPGGQ VWRRANTRFG YTDSFINQTD LYGTFETGSI KHSFAIGAEL
SSEKAERGAF VLATGSTISP RCSALAIARY YCASLFNPNP NDPWINYSND TATGVPTPIT
RAAPSARTQN EANTKAVYAF DSITLTEQLI LNLGARYDRF RTTSTLPLTG GTRPVVRRVD
NIFNWQAGLI FKPTPNTSLY ASYATAATPP NSLLGEGQEQ NALNAVQAAS DALRVEKTKS
FEIGAKADLF GGGLSLTGAV FQTKTKNARV TSDANTVAFI GERRIRGVEL GFNGNITDEW
SVFGGYTYLD AKIVDGGFST LTAAAVGSQA AKTVLVQSVN TGKQFPQTAK HTFTLWTNYK
VTDALSIGGG AFYSSRVYGG YADNRKAVQD AAGVVTIVPA TTTLARAVPS YWRFDARVGY
KVSEAIDLSV NVQNLTNKTY FNQVYSSHYA SIAPGRSAFA TLSFKY
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