| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3988 |
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| Symbol | |
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| ID | 5198706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4378051 |
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| End bp | 4378767 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583545 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_001264471 |
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| Protein GI | 148556889 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.58743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.255402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATATCT TCGCCAACCC CGCCCGCTTC CTCTCGATCG CGCGACCGCT GACCCCCTGG
CTGGGCTGGC CGGGACTGCT GCTGATCGCG GCCGGGCTCG TTTCGGGGCT GTTCCTGACG
CCGCCCGACT ATCTGCAAGG CGAAAGCGTG CGGATCATGT ACGCCCATGT CCCCGCCGCC
TGGCTCGGCA TGGCGGGGTG GAGCGGGATC GCGGTGGCCA GCCTGATGCA GCTCATCTGG
CGGCACCCGC TGGCGGCGGT CGCAGCGCGC GCGATCGCGG TGCCGGGCGC GCTGTTCGCG
GCGATCTGCC TGCTCACCGG CTCGATCTGG GGGCGCCCGA CCTGGGGCAC CTGGTGGGAA
TGGGACGGGC GGCTGACCTC GATGCTCGTC CTCTTCTTCC TCTACATCGC CTATATCGCG
CTGTCCTCGG CGGGGGCGGA GCGCGGCAGC AACGACCGCG TCTCGGCGAT CTTCGGCGTG
GTCGGCGCGG CGAACATCCC GATCATCCAT TATTCGGTCG AATGGTGGCG CACGCTCCAC
CAGGGGCAGA GCATCGGCCT TGCCGGATCG AAGATCGACG GCGCGATCCT GTGGCCGCTG
CCGCTCACCA CGCTCGGCTT CACCCTGTTG TTCGCGGCGA TCGTGCTGAT GCGGATGCGG
GCGATGCTGG CCGAGGCGAA GGTCGAGGCG CGGCTCAAGC GGATGGCGTC CGAATGA
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| Protein sequence | MHIFANPARF LSIARPLTPW LGWPGLLLIA AGLVSGLFLT PPDYLQGESV RIMYAHVPAA
WLGMAGWSGI AVASLMQLIW RHPLAAVAAR AIAVPGALFA AICLLTGSIW GRPTWGTWWE
WDGRLTSMLV LFFLYIAYIA LSSAGAERGS NDRVSAIFGV VGAANIPIIH YSVEWWRTLH
QGQSIGLAGS KIDGAILWPL PLTTLGFTLL FAAIVLMRMR AMLAEAKVEA RLKRMASE
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