| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3949 |
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| Symbol | |
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| ID | 5197914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4335218 |
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| End bp | 4336705 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583505 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_001264432 |
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| Protein GI | 148556850 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCACGA GCCCCGCCTT CGCCGGAAAG CACTATGCCG TCCTCGGCCT CGCCCGGTCG
GGGCTGGCGA CGGTCGAGGC GCTGCTCGCC AGCGGCGCCA AGGTGACGGC GTGGGACTCG
AACGAGGCGG CGCGCCAAAA AATCCTCCCT ATGCGCAGCA TGGGGAGGGG GACCGGCGAA
GCCGGTGGAG GGGGCGACAG CGAAGCTGGC GCTGCGCGCC ACCCCCTCCA CCATCCTGCG
GATGGTCCCC CTCCCCCCGC TGCGCGCGGG GAGGATTTGG TATTGGCCGA CCCGATCGAG
ATCGACCTGA CCGGCTATGC CGGGGTCGTC GTGTCGCCGG GCGTGCCGCT CAACCGGCAT
CCGATCGCCG GCCATGCCGC CAGCTTCGGC GTACCGGTGA TCAGCGACAT CGAGCTGTTC
GCCCAGGCGC GCGCTTCGCT GCCCGCGCAC AAGGTCGTCG GCATCACCGG CACCAACGGC
AAGTCGACCA CCACCGCGCT GATCGCCCAT ATCCTGGAGA CGGCGGGCGT TCCCACGCTG
ATGGGCGGCA ATATCGGCCT GCCGATCCTC GGCCGCGATC CGCTGCCGGC GGGCGGGGTC
TATGTGCTCG AGCTGTCGAG CTACCAGATC GACATCACCC AGAGCCTCGA CTGCGACGTC
GCGGTGCTGA CCAACATCAC CCCCGACCAT CTCGACCGCT ATGACGGCTT CGCCGGCTAT
GCCGCTTCAA AACTCCGCCT CTTCACGATG CAGGGGAAGG GTATCTCGGT CATTGCCGGT
GACGACGAAC CCAGCGTCGA GATAATCAAC GCGCTTCGAA ATCGACCGAT ACATCCAGCC
TCTTTATCTT GGGCGACTAC GGAACAAGGC GAACAGCGGC CCGTCATCAG CCGCGTCGAA
ATGGGCCGTG TGATGCGCGT GATGTCCAGT TCGTTGCAAG GTCAAGAGAA CTGGCCAGCC
CTGCAAGGTC CGCACAATGC GCAGAATGCA GCGCTGGCGA TCGAGACCTG TCGGCTGCTG
GGTTTGTCAT ATAGTCAAAT AGACCAAGGT CTGCGCAGCT ATCCCGGCCT GCCGCACCGC
ATGCAGCGCG TCGCCGAGAA GCGAGGCGTG CTGTTCGTCA ACGACAGCAA GGCGACCAAC
GCGACCGCGA CCGCGCCGGC GCTCGGCGCC TATCCGAAGA TCCACTGGAT CCTCGGCGGG
CTGCCCAAGA CCGACGATCT CGACGATTGC GCGCCCTGGT TCGGCCATGT CGTCGCCGGC
TACACGATCG GCCAGGCGGG CCCGATGTTC GCCCGCATCC TGCGCGAGGC GGGCAAGCCG
GTGACCGAGA GCGGCACGCT CGACCAGGCG GTGGCCGATG CCGCCGCGGC GGCGCGGCCG
GGCGAGGTGG TGATGCTGTC GCCGGCCTGC GCCTCGTTCG ACCAGTTCAG CGACTATGAG
GCACGTGGCG ACGCTTTCCG TCGCGCGGTG GAGGGGCTTC CGCTATGA
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| Protein sequence | MITSPAFAGK HYAVLGLARS GLATVEALLA SGAKVTAWDS NEAARQKILP MRSMGRGTGE
AGGGGDSEAG AARHPLHHPA DGPPPPAARG EDLVLADPIE IDLTGYAGVV VSPGVPLNRH
PIAGHAASFG VPVISDIELF AQARASLPAH KVVGITGTNG KSTTTALIAH ILETAGVPTL
MGGNIGLPIL GRDPLPAGGV YVLELSSYQI DITQSLDCDV AVLTNITPDH LDRYDGFAGY
AASKLRLFTM QGKGISVIAG DDEPSVEIIN ALRNRPIHPA SLSWATTEQG EQRPVISRVE
MGRVMRVMSS SLQGQENWPA LQGPHNAQNA ALAIETCRLL GLSYSQIDQG LRSYPGLPHR
MQRVAEKRGV LFVNDSKATN ATATAPALGA YPKIHWILGG LPKTDDLDDC APWFGHVVAG
YTIGQAGPMF ARILREAGKP VTESGTLDQA VADAAAAARP GEVVMLSPAC ASFDQFSDYE
ARGDAFRRAV EGLPL
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