Gene Swit_3934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3934 
Symbol 
ID5199805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4317700 
End bp4318494 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID640583490 
Productsporulation domain-containing protein 
Protein accessionYP_001264417 
Protein GI148556835 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT ATTCGCGCGA CAGGCTCGGT CCCCAGGACG AGGACCGCCT GCCGTGGCTC 
GAACCGGTCG AGGAGGAATA TGAGGAGAGC GGCGTCGGCA CCGGCCGGCT GATCGTCTGG
CTGGTCGCGG CGCTGATGCT GCTGGCGCTG GTTGTCGGCG GCTATTTCTG GCTGCGCGGC
AACGACAAGG CGACCTCGGG CGAAGGCGCG CTGATCAAGG CGCCCGACGC CTATTACAAG
GAGCGCCCCG GCGAGACCAC CGCCCCGGTC GGCGAGGACG AGATCGTCTA CAGCGCCAGC
AAGGGCAATG AGGTCGAGAG CGTGATCGAC ACCAGCGGCG CGGCCGAGAC GCCGGTCAAC
ATCGATCGCC CGCACCCCGA GGCGCCGGTG CGGACCGCCG CCATCCCGCC GTCCAGCTCC
GCCCCCGCCC CGGCGAAACC GGCGGCGCCG AAGCCGACCC CGACCGTCGA CCAGGCGCTC
GCCCGGCAGG CGGCCAAGCC CGCCGAGGCG AAGCCCGCGC CCAAGCCGGC GGCAGCGGCG
GCGGCCCCCG CCCCCGCGCC GGCATCGGGC GGATCGATGG TGCAGCTCGG CGCCTTCTCC
AGCCAGGCCA AGGCCAATGC GGCGTGGAAG ACGCTGTCGG GCCGCTTCTC CTTCCTGTCG
AGCCTCACCC AGTCGGTGGT GCCGGTGCAG TCGGGCGACA AGACACTCTA TCGGCTGCGC
GCCAATGGCG GCAATGCGGG CGACATCTGC CGCCGGCTCA AGACCGCGGG CGAAAGCTGC
TCGGTGATCG GATAG
 
Protein sequence
MTDYSRDRLG PQDEDRLPWL EPVEEEYEES GVGTGRLIVW LVAALMLLAL VVGGYFWLRG 
NDKATSGEGA LIKAPDAYYK ERPGETTAPV GEDEIVYSAS KGNEVESVID TSGAAETPVN
IDRPHPEAPV RTAAIPPSSS APAPAKPAAP KPTPTVDQAL ARQAAKPAEA KPAPKPAAAA
AAPAPAPASG GSMVQLGAFS SQAKANAAWK TLSGRFSFLS SLTQSVVPVQ SGDKTLYRLR
ANGGNAGDIC RRLKTAGESC SVIG