Gene Swit_3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3885 
Symbol 
ID5200323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4272888 
End bp4274405 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content64% 
IMG OID640583440 
Productflavin-containing monooxygenase 
Protein accessionYP_001264368 
Protein GI148556786 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAT CGATCGGCAT CGTTGGCTGT GGGCTCGCCG GTCTCGTCAC GGCCAAGACG 
CTGAAGCAGT TCGGCTTCGA CGTCCATCTC TTCGAAAAGG AAGCCGATAT CGGCGGGGTG
TGGTCGGCGT CGCGCCGCTA TCCGGGCCTG ACGACGCAGA ATCCACGCGA AACCTATGCA
TTCGCCGACT TCCCGATGCC GGCATCCTAT CCGGAATGGC CGACCGGCGC GCAGGTGCAG
GCCTATCTCG AAACCTATGT CGATCATTTC GGATTGCGCG ACGCGATCCG GCTGAACACC
GAAGTGCTGT CCGCCAGGCC CCTCGCGGAC GGGTGGACGC TCGCCACCCG CGACGCCGCG
TCCGGAACGA CGGCGGAGCA TCGCGTCGAT TATCTGATCG TCTGCAACGG CATCTTCTCG
ATACCCGCCA TTCCGCCGTT CGAGGGCGCG GATGCGTTCG TCGAGGCGGG CGGGCATATC
CTGCACACCA GCCAGTTCAC CGACGTCGGG CTGGCGCGCG GCCGGAACGT GATCGTGGTC
GGCTACGGCA AGTCCTCGTG CGATGCCGCC GTCGCCATCT CGGGCGTCGC CGCCTCGACC
ACGGTCGTCG CGCGCCACCT GATCTGGAAG ATCCCGAAGA AGCTGGCGAA GCTGGTCAAC
TTCAAGCACC TGTTCCTCAA CAGGCTGGGC GAGGGGCTGT TCCCCTACAT CCGGATCAGG
GGGTTCGAGA AATTCCTGCA TGGGCCGGGC AGGCCGCTGC GGAACCTGAT GATGGGAACG
GTGCAGTTCG TCATCAGCCG CCAACTCGGA TTGAAGAAGA TCGGCCTTGA GCCGTCCGGC
AAGCTCGAGA CGATCGCGCG ATCGACCGTC AGCCTGGTCA CCGACGGCTT CTACGAGAAG
ATCGCGGCGG GCGAGATCGG CTTCCACAAG GCCGAGATCG CTTCGTTGCG CCCCGGCGAA
GCCCGCCTCA CCGACGGGAC GACCGTTCCC GCGGGCGTCA TCGTCTGCGG GACGGGATGG
CATCAGCGCT GCGATTTCCT CGCGCCCGAC GTGCTGGAGA AGGTCACCGA CGGGCGGGGC
AATTTCCGCC TCTATCGCTC GATGCTGCCG GTCGGCGTCC CCCGGCTCGC CTTCAACGGC
TATAATTCCT CCTTCTTCAG CCAGTTGAAC GCGGAGATCG GCGCCTTCTG GATCGCGGAC
ATGCTCCGCG GCGGCGTGAC GCTGCCCAGC GATGCGGCGC AGAACGCCTA TGTCGACGAG
CGGCTGGCGT GGATGGAAGC GCGCACCGAC GGCAAGCATT CGAAGGGGAC CAACATCATC
CCCTTCTCGG TCCACCATAT CGACGAGCTG CTGCGGGAAA TCGATCTGGA GCTGCCGGTC
ATGACCCGGA TCAAGCATTG GTTCGTCGCG ATCGATGCGG CCGACTATGC CGGATTGCTG
CCGCGTCTGT TGAAGCGCCA TGGCTTTTCC GGCGCATCGT CCACCATGGC CCGAGGGAGG
AAATATGGCT CGGCTTGA
 
Protein sequence
MIRSIGIVGC GLAGLVTAKT LKQFGFDVHL FEKEADIGGV WSASRRYPGL TTQNPRETYA 
FADFPMPASY PEWPTGAQVQ AYLETYVDHF GLRDAIRLNT EVLSARPLAD GWTLATRDAA
SGTTAEHRVD YLIVCNGIFS IPAIPPFEGA DAFVEAGGHI LHTSQFTDVG LARGRNVIVV
GYGKSSCDAA VAISGVAAST TVVARHLIWK IPKKLAKLVN FKHLFLNRLG EGLFPYIRIR
GFEKFLHGPG RPLRNLMMGT VQFVISRQLG LKKIGLEPSG KLETIARSTV SLVTDGFYEK
IAAGEIGFHK AEIASLRPGE ARLTDGTTVP AGVIVCGTGW HQRCDFLAPD VLEKVTDGRG
NFRLYRSMLP VGVPRLAFNG YNSSFFSQLN AEIGAFWIAD MLRGGVTLPS DAAQNAYVDE
RLAWMEARTD GKHSKGTNII PFSVHHIDEL LREIDLELPV MTRIKHWFVA IDAADYAGLL
PRLLKRHGFS GASSTMARGR KYGSA