| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3881 |
|---|
| Symbol | |
|---|
| ID | 5200319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4268391 |
|---|
| End bp | 4268774 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640583436 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001264364 |
|---|
| Protein GI | 148556782 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5349] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.868081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAC CGTCCGCGCC GCCCCCGCCG GCCCCCCTCG ACGCAGCGCT GCGTGGTCTT
TGCCCGCGAT GCGGGGCGCC GGGCCTGTTC GCCAGCTTCC TGCGCTTCGC CGACCGCTGC
GCCGGTTGCG GCCTCGATTA CCGCGCCTTC AACGTCGGCG ACGGCGCCGC CGCCTTCCTC
ATCCTGATCG TCGGCGGGCT CGTCAGCCTG CTCGCGATCA TCGTCGAGCT CAAATGGTCG
CCGCCACTGA TCGTCCACCT GCTGCTCTGG CTGCCGCTCA CCATCGGGTT GACCGTGCTG
CTGCTGCGCC TCGCCAAGGG ATTGCTCCTC GCGCTCGAAT ATAAGAATGC CGCGCGCGAA
GGCCGGTTCG TGAAGCGCGA CTGA
|
|---|
| Protein sequence | MPEPSAPPPP APLDAALRGL CPRCGAPGLF ASFLRFADRC AGCGLDYRAF NVGDGAAAFL
ILIVGGLVSL LAIIVELKWS PPLIVHLLLW LPLTIGLTVL LLRLAKGLLL ALEYKNAARE
GRFVKRD
|
|---|
| |