| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3877 |
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| Symbol | |
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| ID | 5196185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4265792 |
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| End bp | 4266700 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583432 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001264360 |
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| Protein GI | 148556778 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.153481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCA AGGCTCATCC CGTCGCAACG ACCGCCGCGG CCGACTGGCG CGATTTCCTC
GCGCTGACCA AGCCGCGCGT GCTGACCCTG GTGGTGTTCA CCGGGTGGTG CGGACTGCTG
GCGGCGCCCC AGTCGATCCA TCCGGTGCTG GGCTTCACCG CCGTGCTGTG CATCGCGCTC
GGCGCGGGGG CGGCCGGCGC GCTCAACCAG TGGTATGAGG CCGATCTCGA CGCGATGATG
GCGCGGACGG CGAACCGGCC GCTGCCCGCC GGACGGATGG ACCGGCAGTC GGCGCTCCAC
TTCGGCGTCG GCCTCGGCAT CTTCTCGGTG CTGCTGATGG GCCTCGCGCT CAACGTGCTG
GCGGCCGCGA TCCTCGCCGT CTCGATCCTC TTCTACGTGG TCGTCTACAC GATCTGGCTG
AAGCGCCGGA CGCCGCAGAA CATCGTCATC GGCGGCGCCG CCGGCGCCTT CCCTGCGCTG
ATCGGCTGGG CCGCCGCGAC CGGGCGGGTC GAAACCCTGC CGGTGCTGCT GTTCGCGCTC
GTCTTCCTGT GGACGCCGCC GCATTTCTGG GCGCTCGCCC TGTTCATCAA CTCCGACTAT
GCCCGCGCGG GCGTGCCGAT GCTGCCCGCC GTGGCCGGCC AGCGCGCTAC CCGCATCCAG
ATCATGCTCT ACACCGTCCC GATGGTCATC GCCGCGGTGG CGCCCTGGGC GATGGGGCTG
ACCGGCGCGA TCTACGGCAT CGGCGCGAGC CTCCTGTCGG CGCTGTTCCT GCTGCTCGCG
GCGCAGGTCG GCTTCAGCCG CGAGGCCGAT CCCGCGAGGA TGAAGGCCGA ACGCCGCCTG
TTCGGCTTCT CGATCCTCTA TCTGTTCCTC ATTTTCGGCC TGGTCGTCGC CGACAAGGTG
CTGGCATGA
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| Protein sequence | MASKAHPVAT TAAADWRDFL ALTKPRVLTL VVFTGWCGLL AAPQSIHPVL GFTAVLCIAL
GAGAAGALNQ WYEADLDAMM ARTANRPLPA GRMDRQSALH FGVGLGIFSV LLMGLALNVL
AAAILAVSIL FYVVVYTIWL KRRTPQNIVI GGAAGAFPAL IGWAAATGRV ETLPVLLFAL
VFLWTPPHFW ALALFINSDY ARAGVPMLPA VAGQRATRIQ IMLYTVPMVI AAVAPWAMGL
TGAIYGIGAS LLSALFLLLA AQVGFSREAD PARMKAERRL FGFSILYLFL IFGLVVADKV
LA
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