| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3875 |
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| Symbol | |
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| ID | 5197595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4262993 |
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| End bp | 4264009 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583430 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_001264358 |
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| Protein GI | 148556776 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0276951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGT TGAAGACTAT CATGATGGCG CTTTCGCTGG CGGCCATTCC GGTGGCGGTC
CAGGCTCAGG AAGCCGCTCC GGCTCCCGCG GCGCCCGCCG CGGCGGCCCC GGCAGCCGAG
GCCGCGCCGG CCGCTCCCGC CTTCCAGCAT CGCGCTCCCG AAGCCGATAT CGGCCAGCCG
ATCCCCGGCG GCATCAAGCC CCAGCCGCAG GTGACCAAGG TCGGCCAGGA CGCCGAGTGG
CTGCACAACA GCCTGCTGAT GCCGATCATC ACGGTCATCT CGATCTTCGT CCTGATCCTC
ATCGGCTATG TGGTGATTCG GTTCCGCGCC AAGGCCAACC CGGTCCCGTC GAAGACCTCG
CACAACACGC TGATCGAGAT CGTCTGGACG CTCGTCCCGG TCCTGATCCT GCTGGTGATC
GCGGTCCCGT CGATCCGGCT GCTCGCGCAT CAATATGCGC AGCCCAAGCC GGACCTGACG
ATCAAGGTGA TCGGCAACCA GTGGTACTGG ACCTATCAAT ATCCGGACAA CGGCGATTTC
GAGCTGGTCT CGAACATGCT GCCCGATGCC GAAGCCAAGA AGCGCGGCGA GCCCCGCATG
CTGGCGGTCG ACGAGCGGGT CGTGGTTCCG GTCGACGCCG TGGTCAAGGT CATCGTCACC
TCGAACGACG TGATCCATAG CTGGGCGGTT CCCGCCTTCT GGACCAAGAT GGACGCCGTC
CCCGGCCGCC TGAACGAGAC CTGGTTCAAG GCCGAGCGCG AAGGCCTCTA TTACGGCCAG
TGCTCGGAAC TGTGCGGCGC GCGCCACGGC TTCATGCCGA TCGCGGTCGA GGTCGTCTCG
AAGGACAAGT TCGCCGAGTG GGTGCACTCG AAGGGCGGCA AGATGCCGGG CGAGGAAGCC
GCCGCCGCTG CACCGTCCGC CGCGCCCGAG GCTGCGACTC CCGCTCCGGC GGCCGACGCG
GCCGCGCCCG GCACCGCCGC GCCCGCCACG TCCCAGCCTG CGACCGCGCA GAACTAA
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| Protein sequence | MKTLKTIMMA LSLAAIPVAV QAQEAAPAPA APAAAAPAAE AAPAAPAFQH RAPEADIGQP
IPGGIKPQPQ VTKVGQDAEW LHNSLLMPII TVISIFVLIL IGYVVIRFRA KANPVPSKTS
HNTLIEIVWT LVPVLILLVI AVPSIRLLAH QYAQPKPDLT IKVIGNQWYW TYQYPDNGDF
ELVSNMLPDA EAKKRGEPRM LAVDERVVVP VDAVVKVIVT SNDVIHSWAV PAFWTKMDAV
PGRLNETWFK AEREGLYYGQ CSELCGARHG FMPIAVEVVS KDKFAEWVHS KGGKMPGEEA
AAAAPSAAPE AATPAPAADA AAPGTAAPAT SQPATAQN
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