Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3865 |
Symbol | |
ID | 5199366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4255411 |
End bp | 4256514 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640583420 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_001264348 |
Protein GI | 148556766 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACTAT CTCAAGAGGC TGCCATGACC GACACCGCCA TCGAACCGCA TCACAACCCG CTGGGCCTCG ACGGTTTCGA GTTCGTCGAG TTCACCGGCC CCGATCCTCT GGCGCTCGCC GCGCTGTTCG AGGCGATGGG CTTCACCCAT CTCGGCGACC ACCGGTCGAA GAACGTCCGC CGCTACCAGC AGGGCGACGT CAACTTCATC CTCAACATGG ACAAGGGCGG CCAGGCCGCC GACTTCCGCG CCGCGCACGG CCCCTCGGCC AACGCCATGG CGTTCCGCGT CCATGACGCC GCCAAGGCGC TCGAAAAGGC GGTCGCGCGC GGCGCGACCC CGGTCGAAGG ACCGGTCGGC CCGATGGAGC TGCACATCCC CGCGATCGAG GGGATCGGCG GCTCCAACCT CTATTTGGTC GACCGCTATG GCGCGCAGGA GATCTACGAC GTCGATTTCC GCCCGGTGGC GGGCATGGCG CGCGACCAGC GGTCGGTCGG CCTGCACACG CTCGACCACC TGACCCACAA CGTCATGCGC GGCCGCATGA ATCACTGGGC CGGCTTCTAC GAGAAGGTCT TCAACTTCCG CGAGATCCGC TATTTCGACA TCGAGGGCCA GGCGACCGCG CTGCTCAGCC GCGCGATGAC CGCGCCCGAC GACAAGATCC GCATCCCGCT CAACGAGAGC CAGGACGAGA ACAGCCAGAT CGAGGAATTC CTGCGCGAAT ATAAGGGCGA GGGCATCCAG CACCTGGCGC TGTCGACCGA CAACATCTTC GAGACGGTCG ACCGGCTCCG CGCCAACGGC ATCCGTTTCC AGTCGACCCC CGCCACCTAT TATGAGGGGA TCGACGCCCG CCTGCCCGGC CATGGCCACG ACATCGCCGA GATGCAGAAG CGCGGCATCC TGATCGACGG CGCACCCGAG ACCGGCGGCG GCATCCTGCT GCAGATCTTC ACCGAGAACA TGGTCGGCCC GATCTTCTTC GAGATCATCC AGCGCAAGGG CAATGACGGC TTCGGCGAAG GCAATTTCAA GGCGCTGTTC GAGTCGATCG AGCGCGACCA GATCCGCCGC GGCGTGGTGA AGGTCGATGG CTGA
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Protein sequence | MILSQEAAMT DTAIEPHHNP LGLDGFEFVE FTGPDPLALA ALFEAMGFTH LGDHRSKNVR RYQQGDVNFI LNMDKGGQAA DFRAAHGPSA NAMAFRVHDA AKALEKAVAR GATPVEGPVG PMELHIPAIE GIGGSNLYLV DRYGAQEIYD VDFRPVAGMA RDQRSVGLHT LDHLTHNVMR GRMNHWAGFY EKVFNFREIR YFDIEGQATA LLSRAMTAPD DKIRIPLNES QDENSQIEEF LREYKGEGIQ HLALSTDNIF ETVDRLRANG IRFQSTPATY YEGIDARLPG HGHDIAEMQK RGILIDGAPE TGGGILLQIF TENMVGPIFF EIIQRKGNDG FGEGNFKALF ESIERDQIRR GVVKVDG
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