Gene Swit_3839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3839 
Symbol 
ID5198196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4215441 
End bp4215836 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content69% 
IMG OID640583394 
Producthypothetical protein 
Protein accessionYP_001264322 
Protein GI148556740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.315834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.233166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCT TGATGTTCGT TGCTTTGCTT TCGCTGTCCG CCGCGAGCGC GGCCCATGCC 
GGGCTCGAGC TCGGCCAGCG CCCGATCACC CGCGCCGAGG TCGCCGCCGT CGCCAAGAAG
CAGTTCGCCG AGATGGACGC CGACAGGAAC GGCTTCGTCA GCCCCGCCGA GTTCGAGCGC
TATCGCGAGC TCCAGAACGC CCAGCCCGAC CAGGGCCGCG GCCTGACCCA TATCGGGCGG
AGCTGGTTCG ACAAATGCGA CACCAACGGC GACGGCAAGG TCAGCCTCGC CGAGGCGCAG
GCCCGCCCGC TCGGCCTGTT CGACATGGCC GACGCCAACC GCGACGGCGT CGCCAGCGTC
GCCGAGCAGT CGGTGGCGAT GCTGTTCATG AAGTGA
 
Protein sequence
MTRLMFVALL SLSAASAAHA GLELGQRPIT RAEVAAVAKK QFAEMDADRN GFVSPAEFER 
YRELQNAQPD QGRGLTHIGR SWFDKCDTNG DGKVSLAEAQ ARPLGLFDMA DANRDGVASV
AEQSVAMLFM K