Gene Swit_3790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3790 
Symbol 
ID5200270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4159272 
End bp4159778 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content74% 
IMG OID640583345 
Producthypothetical protein 
Protein accessionYP_001264273 
Protein GI148556691 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.231006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCG TCCGCGTCGA TAGCGCGGCG CTGACCCTCA TCGGGCCCGA CGGACGGACG 
ATCCCCTGCG CGATCGGCCG TTCGGGCGCC TGCCCGGCCG GGGAGAAGCG CGAAGGCGAC
GGCAGGACGC CGCTCGGCCG CTGGCCGATC CGAACCGTGC TGTTCCGCCC TGGCCATGCG
GCGCCGCCCG CCGGGATGAC GCTGCCGTGG CGCTGGGTAC GGCCCGACGA CGGCTGGTCG
GACGATCCCG CCGATCCCGC CTACAACCGC CCGGTGCGGC ACCCCCATGG ATATTCGGCC
GAGCGGCTGG TGCGCGACGA CGGCGCCTAT GACGTGATCG TCGTGCTGGG CCACAACGAC
GCGCCGCCGG TGCCGGGCAT GGGCAGCGCG GTGTTCCTCC ATTGCAGCGA GGGGCGTCCG
ACCGCCGGGT GCGTGGCGGT GGAGAAGGAT GCGTTGCTGG CGGTGTTGCC GCAGCTTCGG
CCGGGCGATG CGGTGGAGAT CGTGTGA
 
Protein sequence
MSGVRVDSAA LTLIGPDGRT IPCAIGRSGA CPAGEKREGD GRTPLGRWPI RTVLFRPGHA 
APPAGMTLPW RWVRPDDGWS DDPADPAYNR PVRHPHGYSA ERLVRDDGAY DVIVVLGHND
APPVPGMGSA VFLHCSEGRP TAGCVAVEKD ALLAVLPQLR PGDAVEIV