Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3705 |
Symbol | |
ID | 5196304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4066775 |
End bp | 4067806 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640583261 |
Product | hypothetical protein |
Protein accession | YP_001264189 |
Protein GI | 148556607 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCA TCCGCCTGCC CGGCATTCCC AAGCGGGTCT TTATTATTGT CGCTGTCGTC GCAATAATCG GGATCGGATG GGTCTGGATG CAGCGTGGCA GCCATGACGA CGAGGCTCTG CGCCTCTATG GCAATGTCGA CATTCGCGAG GTTCAACTCG CCTTCCGGCA ACCCGGTCGT GTTGCGCAGA TGCACTTCGA TGAAGGAGAT CACGTCGAAG CGGGTGCGCG CATGGCTGTC CTCGACGCGC AGCCGTTCGA GGAAGGTGTG GCTGCGGCCG ATGCGTCCGT GGGTGTTGCT CAGGCGGACC TCGACAAATT GCTCCGCGGC CTGCGCCCTC AGGAGATCGT CCAGGCGCGC GAGGCACTCA ATCAGGCTTC GGCTGTCGCC AGAGATGCGG AGCGCAATTT CAATCGTCAG AGCCAATTGC TCGCCTCAGG CGCCGCCAGT CAAAAGACGG TCGATGCCGC CCGCACCGCG CGCGACCAAG CCGTCGCCGG CGCCAATGCG GCCCGGGCCG CCTATTCACA AGCCACAGAA GGCTTCCGCA AGGAAGATGT CGCAGCGGGG CAGGCCCGCC TCGCCGCCGC ACAAGCGGCA CGGGCGCAAG CCGCCACTGC GCTTGCCGAT ACAGTGCTGC TTGCGCCGCG CACCGGCACC GTGATTGCCC GCGTGCGCGA ACCCGGCAGC ATGGTTGTTA GCCAGACCCC GATCTACAGC GTGAGCCTTG ATGCGCCGGT TTATGTGCGT GCCTATATCG GAGAACCGGA TCTGGGGCGC ATCGCGCCCG GGATGCGGGT TCGCGTCCAT AGCGACTCGT CCGACAAGGT TTATCAAGGC CAGATCGGGT TTATTTCACC GCGCGCCGAG TTCACGCCAA AAACGGTAGA GACCACGGAT CTGCGCACGG ATTTGGTCTA TCGCCTGCGG ATCGTGGTCA CCAATGCGGA TGCCGCGCTG CGCCAGGGCA TGCCGGTGAC CATCGACGTC GATGCCGGGC CAGCATCCAG CGCGCAGGCC AAAGGCCGCT GA
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Protein sequence | MKRIRLPGIP KRVFIIVAVV AIIGIGWVWM QRGSHDDEAL RLYGNVDIRE VQLAFRQPGR VAQMHFDEGD HVEAGARMAV LDAQPFEEGV AAADASVGVA QADLDKLLRG LRPQEIVQAR EALNQASAVA RDAERNFNRQ SQLLASGAAS QKTVDAARTA RDQAVAGANA ARAAYSQATE GFRKEDVAAG QARLAAAQAA RAQAATALAD TVLLAPRTGT VIARVREPGS MVVSQTPIYS VSLDAPVYVR AYIGEPDLGR IAPGMRVRVH SDSSDKVYQG QIGFISPRAE FTPKTVETTD LRTDLVYRLR IVVTNADAAL RQGMPVTIDV DAGPASSAQA KGR
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