| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3646 |
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| Symbol | |
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| ID | 5196868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4004538 |
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| End bp | 4005770 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583201 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001264130 |
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| Protein GI | 148556548 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.200592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.71441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGA CCGAAGCCAC CGCAACGATG GAGCGGCCGC AGGGCGCGCG ATGGCTGGCC
GCGATACCCG CGATGATGGC GGGGGCCTGC TCGATCGGCC TGATCTTCAC CGCGCTGACC
CCCGTCCTCC CCAGGCTGTC GGCGCAGTTC GGCGGCGGCA AGGTCGGCGC CGAGATCGCC
GGGCAGATGG TGATGTCGGT CCCCGCGATC GGCCTCATCC TGGGCGGCAT CGGATCGGGC
TGGCTGATCG AGCGGGTCGG CGCGCGCCGG CTGCTGCTCG CCTCGCTCCT GCTCTACGCG
CTGTGCGGAT CGGCCGGGCT GTGGGTCGGC GATCTCTGGG CGCTGTTCGT GTCGCGCACG
CTGCTCGGCT TCTTCACCGC CTGCATCTCG ACCTCCGCGA ACAGCTTCAT CGGCGAGTTT
TTCGACGAGA AGGGGCGCGG CCGGATGCTC TCCGCGATGA CGGTGGTGGG CAGCCTGCTC
GCGACCTGCG CGGTGCTGAT GTCGGGCTGG TTCGGCGAGC ATGTCGGCTG GCGCGCGCCG
TTCGCCATCT ACCTGATCGT GCCGGCGGTC CTGTTCACCC TGGCGGCGAT CGGCCTGCCC
GCCATCCCGA TCCGCACATC GGGCCATGGC GAGGCCGGGC AGGGCGTGTT CCTGCGCAAC
TGGCCGATCT ACCTGATGAT CGGCGCGCTC TACGTCGTGC TGATGATGAC CAGCACGCAG
ATATCCTATC TGCTCACCGA ACGCGGCATC ACCAGCCCGA TCATCCAGTC GCGGGTGATC
AGCATGGCCT TCGCCTGGCT GATCGTCGGC GCGATCTTCT ACGGGACGAT GCAGGGCCGG
ATCGGCTGGG CGCCGACCTA TTATATCGGG CTGCTGTCGC TCGGCCTCGG CATCGGCGGG
CTTGGCTTCG CGCCCGACGC CTGGCTGGCG GGCGCCGCCA CCGCGCTCAA GGGCTTCGGC
GCCGGCATCC TCAGCCCCGC CTTCATCCAC CTCGTCCTCA ACCGGTCGAC GCCGGAGACG
CGCGGCCGCG CGCTCGGCCT GATGACGACG TCGATGTTCG TCGGCGACCT CGCCAACCCG
ATCGTGGTGG CGCCGTTCCG CGCCGTCTTC GGGATGCACG GCGCCTTCAT CTCGCTGGGT
TCGCTGGTGC TGCTCGGCGC CGTCATGGCC TTCTTCACCG GGCTGGGACG CAAGGCCCCG
CCCGCCGCCG GGCACAGGAG GGTTGCGGCA TGA
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| Protein sequence | MSATEATATM ERPQGARWLA AIPAMMAGAC SIGLIFTALT PVLPRLSAQF GGGKVGAEIA
GQMVMSVPAI GLILGGIGSG WLIERVGARR LLLASLLLYA LCGSAGLWVG DLWALFVSRT
LLGFFTACIS TSANSFIGEF FDEKGRGRML SAMTVVGSLL ATCAVLMSGW FGEHVGWRAP
FAIYLIVPAV LFTLAAIGLP AIPIRTSGHG EAGQGVFLRN WPIYLMIGAL YVVLMMTSTQ
ISYLLTERGI TSPIIQSRVI SMAFAWLIVG AIFYGTMQGR IGWAPTYYIG LLSLGLGIGG
LGFAPDAWLA GAATALKGFG AGILSPAFIH LVLNRSTPET RGRALGLMTT SMFVGDLANP
IVVAPFRAVF GMHGAFISLG SLVLLGAVMA FFTGLGRKAP PAAGHRRVAA
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