| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3609 |
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| Symbol | |
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| ID | 5197347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3968299 |
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| End bp | 3970095 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583164 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001264093 |
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| Protein GI | 148556511 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.359556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCGA CGCTCGACCT CTGGCCGATC GGCAATTGCC AGGCGTCCGC GCTGGTCGAC
CGCGCCGGGC GCTTCGTCTG GGCCTGCGTG CCGCGGGTCG ACGGCGATCC GGTGTTCTGC
TCGCTGCTCG ACGACAATGT GCCGGCGGCG CCGGGCGCGC GCGGCTTCTG GGAGATCGAC
CTGGAGGACT GCGCCGAGAC CCGGCAGGAC TATATCCGCA ACACCCCGAT CCTCGTCACC
CATCATGTCG ACGCGGCCGG CAGCGCGATC GAGGTGGTCG ACTTCTGCCC GCGCTTCTTC
CGCCACGGCC GGATGTACCG CCCGGTCGCC TTCTGCCGGA TCGTCCGCCC CACCGCGGGC
AGCCCGCGCA TCCGCGTCCG GCTGCGCCCC GCGCACGACT GGGGCGGCGG CGATCCCGAA
CGGACGCGCG GGTCGAACCA TATCCGCTAC ATATTGAGCG AGACGACCCT GCGGCTGTCG
ACCTCGGCGC CGGTCGGCTG GCTCGAGAGC GAGCGGCTGT TCCGGGTCGA ACGGCCGCTC
CACTTCTTCC TCGGCCCCGA CGAGAGCTTC GTCGGCGACA TCGGCGACAC GCTCGACACC
ATGCTCGAAC ACACCGCGCA CGAATGGCGC CGCTGGGTCC GGGCGCTGGC CACCCCGGTC
GAATGGCAGG ACGCGGTGAT CCGCTCGGCG ATCACCCTCA AGCTGTGCCA GCACGAGGAG
ACCGGCGCGA TCGTCGCGGC GCTCACCACC TCGATCCCCG AACATGCCGA TTCCCAGCGC
AACTGGGACT ATCGCTACTG CTGGATCCGC GACGCCTATT ACACCGTGCA GGCGCTCAAC
CGGCTCGGCG CGCTCGACGT GCTGGAAAGC TATCTCGAAT ATCTGCGCAA CATCGTCGAC
AACGCCAAGG GCGGCCATAT CCAGCCCCTC TACGGGGTCG GCGGCGAGGC GACCCTGGTC
GAGGGCGTCG CCCCTGCGCT CAACGGCTAT CGCGGCATGG GACCGGTCCG CATCGGCAAC
CAGGCCTATG AGCAGGTCCA GCACGACGCC TATGGCCAGA TCATCCTGTC CAACGCGCAG
GCCTTCTTCG ACCAGCGGCT CTACCGCATG GCCGGCGAGG AGGATTTTCG CGCGCTGGAG
AAGGTCGGGG AGCGCGCCTG GCAGGTCCAT GACCAGCCCG ATGCCGGGCT GTGGGAATTG
CGCACCAAGA GCTATGTCCA CACCTATTCG GTGGCGATGT GCTGGGCGGC CTGCGACCGG
CTGGCCAACG CGGCCGAGGC GCTGGGGCTG GGGGAGCGGG CCGGTTTCTG GCGCGCGCGC
GCCGACGCCA TCCGCGAGCG GATCGAGACC GACGCCTGGC GGGAGGAGAC GCAGCGCATC
TCCGCGACCT TCGATGGCGA CGATCTCGAC GCCAGCCTGA TCCAGCTGCT CGACCTGCGC
TTCGTCAAGC CGGGCGACGA GCGCTTCCAG GGCACGCTGC GCGCGGTCGA GGACGGGCTG
CGGCGCGGGT CGCACATGCT GCGCTACGCG ACCGAGGACG ATTTCGGTCT GCCGCACACC
GCGTTCAACA TGTGCACCTT CTGGCTGATC GAGGCGTTGT GGCTCACCGG GCGGACCGAT
GATGCGAGGG AATTGTTCGA GGAGATGCTG TCGCGCCGCA CCCGGGCCGG GCTGTTGTCC
GAGGATATCG ATCCGGCGAC GGGCGAGCTG TGGGGCAATT ATCCGCAGAC CTATTCGCTG
GTCGGCCTGA TCAATTGCGC CGCGTTGCTG AGCAAGCCGT GGAGTTCGGT GCGATGA
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| Protein sequence | MTATLDLWPI GNCQASALVD RAGRFVWACV PRVDGDPVFC SLLDDNVPAA PGARGFWEID
LEDCAETRQD YIRNTPILVT HHVDAAGSAI EVVDFCPRFF RHGRMYRPVA FCRIVRPTAG
SPRIRVRLRP AHDWGGGDPE RTRGSNHIRY ILSETTLRLS TSAPVGWLES ERLFRVERPL
HFFLGPDESF VGDIGDTLDT MLEHTAHEWR RWVRALATPV EWQDAVIRSA ITLKLCQHEE
TGAIVAALTT SIPEHADSQR NWDYRYCWIR DAYYTVQALN RLGALDVLES YLEYLRNIVD
NAKGGHIQPL YGVGGEATLV EGVAPALNGY RGMGPVRIGN QAYEQVQHDA YGQIILSNAQ
AFFDQRLYRM AGEEDFRALE KVGERAWQVH DQPDAGLWEL RTKSYVHTYS VAMCWAACDR
LANAAEALGL GERAGFWRAR ADAIRERIET DAWREETQRI SATFDGDDLD ASLIQLLDLR
FVKPGDERFQ GTLRAVEDGL RRGSHMLRYA TEDDFGLPHT AFNMCTFWLI EALWLTGRTD
DARELFEEML SRRTRAGLLS EDIDPATGEL WGNYPQTYSL VGLINCAALL SKPWSSVR
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