| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3588 |
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| Symbol | |
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| ID | 5197257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3950317 |
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| End bp | 3951216 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583143 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001264072 |
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| Protein GI | 148556490 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.300751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.17098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCT ACCTGCCAAC CCTGAAGCAG CTCCAATATC TGGTGGCGCT CAAGGATCAC
GGCCATTTCG GCCGCGCGGC GGACGCCTGT TTCGTGACCC AGTCGACCCT GTCGGCCGGG
CTGCGCGAGC TCGAATCGCT GATCGGCATC ACCCTGGTCG AGCGGACCCG GCGAGTCGTG
CGCTTCACCC CGCTCGGCCT GCGCATCGCG GAGAAGGCGC AGCGCGTCCT GCGCGAGGCG
GAGGAGCTGG GCGACCTCGC CCGCGCGGCG GGCAAGCCGT TGTCGGGCGA CCTGCGCATG
GGGGTGATCC CGACGATCGC GCCCTTCCTG CTGCCGCGCA TCCTGCCGAA GCTGCGGTCG
GCCTGGCCCG ACCTCAAGCT CTACCTGCGC GAGGAGACGA CGGGCGCCGC CTGCGACTCG
CTCCATCGCG GCCATCTCGA CTGCGTGCTG CTGGCGCTGC CCTATCATTG CGGCGACATC
GAATCGGTCG ACCTGTTCCT CGACCGGCTG TTCGTCGCCT TCCCGGAGGG CGAGATGGAC
GGGCCCGCGC GCGGCATCGT CGCCGACGAC ATCGACGAGA GCCGGCTGCT GCTGCTCGAG
GACGGGCATT GCCTGAAGGA CCATGCCCTC GCCGCCTGCA ACCGTCCCGA GCTGCGCGCC
GAGGCGGCGA TGCTGGGAAC CTCGCTCCAC ACGCTGGTGC AGATGGTCGA CAACGGGCTG
GGCGTCACGC TGCTGCCGAA GATGGCGCTC GACGCCGGCA TCCTCGAAAA CACCCATGTC
GTCGCCAAGC CGCTCGACGC CGACCATCCG GCCCGCCGCA TCGCGCTCGC CTGGCGCCGC
GGCTCCCCGC GCGAGAAGGA GTTCAAGCTG CTCGCCGACG CGTTGCGCGA GGCGGAGTAA
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| Protein sequence | MATYLPTLKQ LQYLVALKDH GHFGRAADAC FVTQSTLSAG LRELESLIGI TLVERTRRVV
RFTPLGLRIA EKAQRVLREA EELGDLARAA GKPLSGDLRM GVIPTIAPFL LPRILPKLRS
AWPDLKLYLR EETTGAACDS LHRGHLDCVL LALPYHCGDI ESVDLFLDRL FVAFPEGEMD
GPARGIVADD IDESRLLLLE DGHCLKDHAL AACNRPELRA EAAMLGTSLH TLVQMVDNGL
GVTLLPKMAL DAGILENTHV VAKPLDADHP ARRIALAWRR GSPREKEFKL LADALREAE
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