| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3541 |
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| Symbol | |
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| ID | 5196178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3899969 |
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| End bp | 3901552 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583096 |
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| Product | peptidase M23B |
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| Protein accession | YP_001264025 |
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| Protein GI | 148556443 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.59745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.860043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCCGCA GCGACGGCCA GGATCTTTCG GCACAGGGCT ACGCGGGCGG CGCTAGCCGG
GGCGCGCTCG TCGTCGCCCG GACGAACCGC TTCCCCGCGA TCGGCCGGCT GATCGACAGC
CCGATCGGCG ATGCGGTCGA CCGGCTCGCC GGCGCCGACC TCGTCGTCGA CCTCGGCGCG
CGGATCGGAT CGCGCGAATG GTTCCGCGGC CTGCTCACCT GCCTGGGGCT CTGCACCGCC
GCGGGGATGA TGGCGCCCGA TTTCAAGCCG ATCGGCTTCG TCGCCGAACC GCCGATGAGC
GCCGCGCACC AGCAACAGGT CCGCACGCTC GGCATCGCGC CGCTCGGCCT GGGTGGCGAT
ACCGGCCAGC GCATCGCGGC GACCAGCGCG GTCGAGCCGC TCACCGACAC GCCCGAGCGG
CCGCGCGTCG AGCTGGCGGC GACGATCGGG CAGGGCGACG GCTTCGCCCG CGTCCTCGAA
CGCGCGGGCG TCTCGCGCGA CGAGGCGGGC AAGGTCGCGT CGATGGTCTC CGACGCCGTG
CCGCTCGACG ATCTTCGCGC GGGCACCCGG ATGGACCTGG TGCTCGGCCG CCGCGAGGTG
AAGAGCGACC CACGCCCGCT CGAGACGCTC GACTTCCGCG CCCGCTTCGA CCTCAAGCTC
GCGGTCGAGC GGGTCGACGG CGCGCTCCGC CTCAAGCGCA TCCCGATCGC GGTCGACCAT
ACGCCGCTGC GCATCCAGGG CCGGGTCGGC TCCAGCCTCT ACCGTTCGGC GCGCGCCGCC
GGCGTCCCCG CCGACGCGAT CGAGGCCTTC ATCAAGGCGA TCTCGCAGAA GCTGTCGATG
CGCAGCATCG GCTCCGACGC GCGCTTCGAC GCGATCATCG AGCATGCCCG CGCCGAGACC
GGCGAGGTCA AGGTCGGCGA CCTGCTGTTC GCGGGCGTCA CCGAGGGCGG CAAGAAGGTC
CAGATGGTCA AATGGACGAC CGGCAACCGC GCGCAGTGGT ACGAGGCGTC GGGCGTCGGC
GAGACCAAGG GCGTGATGCG CAAGCCGGTG CTGGGCCACC TCACCTCCAG CTTCGGGATG
CGCTTCCACC CGATCCTCGG CTTCTCGCGG ATGCACCAGG GCGTCGACTT CGGCGCGCCG
ATGGGTTCCC CGATCGTCGC CGCGAGCGAC GGCGTCGTCA CCTTCGCCGG GCGGCATGGC
GGCCATGGCA ATTATGTCCG CCTCAACCAT GCCGGCGGCA TCGCCACCGG CTATGCGCAT
ATGAGCCGGA TCATCGCCAA GGCCGGCCAG CATGTCCGCC AGGGCGAGCT GATCGGCTAT
GTCGGCTCGA CCGGCCTGTC GACCGGCCCG CACCTCCATT ACGAGATGTA TCGCAACGGC
AAGGCGATCA ACCCGACCTC GATGAAGTTC ACGACGGTCC AGCAGCTCGC CGGCCGCGAC
CTCGCCAATT TCAAGGCGAA GCTCAACGGC CTGCTGTCGG TGCGCGTCGC CCATGGCGCC
GGCGCCGAGC CCAAGGCCGA GAAGAGCGCC GAGACCGACG GCAAGGACGA CGGCAAGGGC
AGGGGCAAGG CGAAGAAGGG CTGA
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| Protein sequence | MFRSDGQDLS AQGYAGGASR GALVVARTNR FPAIGRLIDS PIGDAVDRLA GADLVVDLGA
RIGSREWFRG LLTCLGLCTA AGMMAPDFKP IGFVAEPPMS AAHQQQVRTL GIAPLGLGGD
TGQRIAATSA VEPLTDTPER PRVELAATIG QGDGFARVLE RAGVSRDEAG KVASMVSDAV
PLDDLRAGTR MDLVLGRREV KSDPRPLETL DFRARFDLKL AVERVDGALR LKRIPIAVDH
TPLRIQGRVG SSLYRSARAA GVPADAIEAF IKAISQKLSM RSIGSDARFD AIIEHARAET
GEVKVGDLLF AGVTEGGKKV QMVKWTTGNR AQWYEASGVG ETKGVMRKPV LGHLTSSFGM
RFHPILGFSR MHQGVDFGAP MGSPIVAASD GVVTFAGRHG GHGNYVRLNH AGGIATGYAH
MSRIIAKAGQ HVRQGELIGY VGSTGLSTGP HLHYEMYRNG KAINPTSMKF TTVQQLAGRD
LANFKAKLNG LLSVRVAHGA GAEPKAEKSA ETDGKDDGKG RGKAKKG
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