Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3525 |
Symbol | |
ID | 5197298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3880335 |
End bp | 3881060 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640583080 |
Product | hypothetical protein |
Protein accession | YP_001264009 |
Protein GI | 148556427 |
COG category | [S] Function unknown |
COG ID | [COG4340] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.164582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTCCC AGACCGACGC GCCGCCCGCC TTCGACCCGA CCTCGCTTCG CCGCGACGGC TTCGCGATCG TCGAGGCGGC GGAGATGTGC GCGCTGCTGC CGGCGGCGGC GGCCGAGGAT TTCGCGGGCT TCGCGGGAAG CTGGGAACGG CTCGGCGACG ATCGCTTCAT GGCCGACGGG GGGCGCTACC GGCGGCGGCG GCACGCGGTC TTCGCGGTCG GGCGGGACGT CGTGCGCAAG CCGCACCAGC CGCATTACCA GAGCCGCGAC TACAATATCC TCAACGGCGG GATCGAACGC TGGTTCGAGC CGGTCGAGCC GGACATCGCC GCCGGCCCGA CCCTGCGGGG CGTGATCGGC TTCGCGGATG GCGTCTTCAC GGCGTCGTCG TCCCGCCCCG AAACGGGATG GCATGTCGAG GTCCACCAGT TCCGGATCGA GGCCGCCGCC GACATGGCCG GGCTGCCGAC GCCGGAGGGG CTCCACCGCG ACGGCGTCGA CTGGGTGCTG GTGATGCTGG TCGCGCGCCA CAATGTCGAG GAGGGCGTGA CCAAGATCCA CGGGCCCGAC CGGCGCGAGA TCGGCTCCTT CTGCCTCGTC GAGCCGTTCG ACGCGGTGCT GATCGACGAT CACCGCATCT ATCATGCGGT CACCCCGATC GTGCCGATCG ATCCCGAGCG GCCCGCCTAT CGCGACGTGC TCGTCGTCAC TTTCCGGGCG GCGTAG
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Protein sequence | MLSQTDAPPA FDPTSLRRDG FAIVEAAEMC ALLPAAAAED FAGFAGSWER LGDDRFMADG GRYRRRRHAV FAVGRDVVRK PHQPHYQSRD YNILNGGIER WFEPVEPDIA AGPTLRGVIG FADGVFTASS SRPETGWHVE VHQFRIEAAA DMAGLPTPEG LHRDGVDWVL VMLVARHNVE EGVTKIHGPD RREIGSFCLV EPFDAVLIDD HRIYHAVTPI VPIDPERPAY RDVLVVTFRA A
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