| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3477 |
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| Symbol | rplJ |
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| ID | 5197755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3822173 |
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| End bp | 3822688 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583026 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_001263961 |
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| Protein GI | 148556379 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.232416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000717521 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGATCGAG CTCAAAAAGC CGAGCTGGTC GCCGATCTGA AGAGCACCTT CGAGGGCACG
AGCGTGGTGA TCGTCACCCG CAATCTCGGC CTCACGGTCG CGCAGTCCAC TGCGCTCCGC
ACGAAGATGC GCGAAGCCGG CGCCAGCTAC AAGGTATCGA AGAACAAGCT CGCCCGCATT
GCCCTCGAGG GCACGACCTA TCAGGCGATC AACGATCTCC TGGTCGGTCC GACCGCGCTC
GCCACCTCCG CCGATCCCGT CGCCCCCGCA AAGGTGATCG TGGATTTCGC GAAGACCAAC
GACAAGTTGG AAATCGTCGG CGGCGCGATG GGCGAGACCG TCCTCGACGT GGCCGGCGTG
AAGGCGCTGG CCGAGCTGCC GTCGCTCGAC GAGCTGCGCG CCAAGATCGT GGGCCTCATC
CAGGCGCCCG CGACCAAGGT CGTCCAGATC GTCCAGGCCC CGGCCGGCCA GCTGGCCCGG
GTGTTCGGCG CTTATGCGGC GAAAGAAGAC GCCTGA
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| Protein sequence | MDRAQKAELV ADLKSTFEGT SVVIVTRNLG LTVAQSTALR TKMREAGASY KVSKNKLARI
ALEGTTYQAI NDLLVGPTAL ATSADPVAPA KVIVDFAKTN DKLEIVGGAM GETVLDVAGV
KALAELPSLD ELRAKIVGLI QAPATKVVQI VQAPAGQLAR VFGAYAAKED A
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