| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3455 |
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| Symbol | |
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| ID | 5200974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3791084 |
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| End bp | 3791512 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640583003 |
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| Product | large conductance mechanosensitive channel protein |
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| Protein accession | YP_001263939 |
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| Protein GI | 148556357 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0277457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0882552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGCAGG ATTTCAAGGC CTTCATCAAC AAGGGCAATG TCGTCGATCT CGCCGTCGCG
GTGATCATCG GCGCGGCCTT CGGCAAGATC GTCTCGTCGC TGACCGACGA TCTGATCATG
CCGCTGATCG GCTACTTCAC CGGCGGGCTC GACTTTTCGA GCCACTTCAT CCGTCTTGGG
GAAATCCCCG CCAACTTCAC CGGCTCGGTC ACCAGCTATG CCGACCTGAA GAATGCCGGC
GTCCCGCTGA TCGGCTTCGG CCAGTTCATC ACCGTCGCCG TCAACTTCCT GCTGATCGCC
TTCGTGGTGT TCCTCGTCGT CCGCGCGGTG CAGCGGTTCA ACAAGGCCGA GGAAGCCAAG
CCGGCCGAGC CCGCCGAGGA CGTCGTCCTG CTCCGCGAGA TCCTGGCCGA GCTCAAGAAG
AAGGGCTGA
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| Protein sequence | MLQDFKAFIN KGNVVDLAVA VIIGAAFGKI VSSLTDDLIM PLIGYFTGGL DFSSHFIRLG
EIPANFTGSV TSYADLKNAG VPLIGFGQFI TVAVNFLLIA FVVFLVVRAV QRFNKAEEAK
PAEPAEDVVL LREILAELKK KG
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