Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3449 |
Symbol | |
ID | 5200167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3785218 |
End bp | 3787662 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640582997 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_001263933 |
Protein GI | 148556351 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.206852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCGA TCGACGCCGT CCTGCCCGAC CTGATCGCCG CGCTTCGCGA CGGGCCGAAC GCCGTGCTCG TCGCCCCGCC GGGCGCGGGC AAGACGACGG CGGTGGCGCC GGCGCTGCTC GGGCAAGAGT GGTGCGAGGG ACAAATCCTG TTGCTCTCCC CCCGCCGCCT CGCCGCCCGC GCCGCGGCCG AGCGGATGGC CGAGCTGGCC GGCGAGCCGG TCGGCCGGAC GATCGGCTAT GCCACCCGGC TCGACGCCAG GCAGTCGGCC GCCACCCGCA TCCTCGTCGT CACCGAGGGC ATCTTCGTCA ACCGCATCCA GGCCGATCCC GACCTGCCCG GCGTCTCGGC GGTGCTGTTC GACGAGGTCC ATGAGCGCAG CCTCGACAGC GATTTCGGCC TCGCCCTCGC GCTCGACGCG CAGGCGGCGC TGCGGCCCGA CCTGCGCCTC GTCGCGATGT CGGCGACGCT CGACGGCGGG CGCTTCGCAG CTCTCATGGG CGCCGCGCCG CTGGTCGAAA GCGAGGGGCG CAGCCACCCG ATCGAGATTC GCCATGCCCC GCGATCGGCC GAGAAGCGGA TCGAGGACGA CATGGCAGCG ACGATCCGCC GCGCGCTGGC GGAGGAGGGC GGCAGCCTGC TCGCCTTCCT CCCCGGCGTG GCGGAGATCG AGCGCACCGC CGAGCGGCTC GAAGCGGGGT TGCCCGGCGA CGTCGTCCTC CACCGGCTGC ACGGCTCGCT CGAACCCGCC GAGCAGCGCG CGGCGATCGC GCCCGCGCCG CCGGGCAAGC GCAAGCTGGT GCTCGCCACG TCGATCGCGG AGACCAGCAT CACCATCGAC GGGCTGCGCA TCGTCGTCGA TTCGGGGCTC GCCCGCCGGC CGCGCTACGA CCGCGCGGCG GGGATGACCC GGCTCGTCAC CGAACGGGCC AGCCAGGCGG CGGCCACCCA GCGCGCCGGC CGCGCCGGGC GCCAGCAGCC GGGCGTGGTC TATCGCCTGT GGGAGGCGGC GGCGACCGCC GGCCTGCCCA AATATGACCC GCCCGAGATA TTGGAGACCG ACCTGTCGGC GCTGACGCTC GACTGCGCGC TGTGGGGCGT CGCCGATCCG GGCACGCTGC GCTGGCTCGA TCCCCCGCCC GAGGCCGCGA TCGGCGAGGC GCGCCAGCGG CTGGCGCGGC TGGAGGCGAT CGACGAGGAC GGCCGCCCGA CCGCGCATGG CCGGGCGATC GCCGCGCTGC CGCTGCCGCC GCGCCTCGGC CATATGCTGA TCCGCGCCGC CGAGGGCGGC TTCGCCGAGA CCGCGGCCGA GGTCGCGGTG CTGCTTTCGG AACGCGGGCT CGGCGGCTCG GATGCCGATC TGGAGCTCAG GCTGCGGCGC TGGCGCGGCG AGCGCGGCAA GCGGGCCGAG GGCGCGCGCC AGCTCGCCGG GCGCTGGGCG CGGCTGGCGG GGAAGGGCGG CCGCGACGAC GCGATGATCG CCGATTGCGT CGCGCTCGCC TATCCCGACC GGGTCGCGCG GCGGCGCTCG GCCTCGGGCG AGGACTGGAT CTCGCGCGGC GGGCGCGGCT TCCGGCTCGA TCCCGCCTCG CCGCTGGCGC GCAACGAATG GCTCGCCGTC GCCGAGATCC AGGGCGCGGC CTCGGGCGCG CGCATCCTGT CGGCGGCGCC GATCGACCCC GACGAGGTCG AGCGGCTGTT CGCCGATCAT ATCGAGGTCC GCCGCACCGC CCGCTTCGAT CCCGCGACCG GCGCGGTCGA GGCTCGGCGC GAGCGTCGGC TCGGCGCGAT CCTGCTCGCC GCCGGGCGCG ACGAGACCGC CTCGCCGGCG ATGATCGGCG CCGCGCTGAT CGACGCGGTC CGCACCCGCG GGCTCGACCT GATCGACTGG TCCGAGGGCG CGGCGGCGCT CCGCGCCCGC GCCGCCTTCG CGGCCGAACA GGGCGGCGAA CTGCCCGACC TGTCCGATGC GACGCTGATG CTCACCCTCG ACGACTGGTT CGCGCCGCTG GTCGAGGGCA AGCGCCGCCT GTCGGACATA TCGGCGGCCG AGCTGTCGAA CGCGCTCCAC GGCCTGCTCG GCTGGGACGG GCGCCAGGCG CTCGACCGGC TCGCGCCCGA GCATCTCCAG TCGCCGGCCG GCAGCCGCCA CGCGATCGAC TATGCGGCCG AGGGCGGCCC GGCGGTCGAG GTGCGGCCGC AGGCGCTGTT CGGCCTGTCG GCGCATCCGA TGGTGGCGGG CGGGCGGGTA CCGCTCACCC TGCGGCTGAC CTCGCCGGCC GGCCGGCCGA TCCAGACGAC CAAGGACCTG CCCGGCTTCT GGGCGGGAAG CTGGACCGCG GTCGCCAAGG AGATGCGCGG CCGCTATCCC CGCCATCCCT GGCCCGACGA CCCCGCCGCC GCCGATCCGA CCCTGCGGAC CAAGAAAGCG GCGCAGCGTC CTTGA
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Protein sequence | MLPIDAVLPD LIAALRDGPN AVLVAPPGAG KTTAVAPALL GQEWCEGQIL LLSPRRLAAR AAAERMAELA GEPVGRTIGY ATRLDARQSA ATRILVVTEG IFVNRIQADP DLPGVSAVLF DEVHERSLDS DFGLALALDA QAALRPDLRL VAMSATLDGG RFAALMGAAP LVESEGRSHP IEIRHAPRSA EKRIEDDMAA TIRRALAEEG GSLLAFLPGV AEIERTAERL EAGLPGDVVL HRLHGSLEPA EQRAAIAPAP PGKRKLVLAT SIAETSITID GLRIVVDSGL ARRPRYDRAA GMTRLVTERA SQAAATQRAG RAGRQQPGVV YRLWEAAATA GLPKYDPPEI LETDLSALTL DCALWGVADP GTLRWLDPPP EAAIGEARQR LARLEAIDED GRPTAHGRAI AALPLPPRLG HMLIRAAEGG FAETAAEVAV LLSERGLGGS DADLELRLRR WRGERGKRAE GARQLAGRWA RLAGKGGRDD AMIADCVALA YPDRVARRRS ASGEDWISRG GRGFRLDPAS PLARNEWLAV AEIQGAASGA RILSAAPIDP DEVERLFADH IEVRRTARFD PATGAVEARR ERRLGAILLA AGRDETASPA MIGAALIDAV RTRGLDLIDW SEGAAALRAR AAFAAEQGGE LPDLSDATLM LTLDDWFAPL VEGKRRLSDI SAAELSNALH GLLGWDGRQA LDRLAPEHLQ SPAGSRHAID YAAEGGPAVE VRPQALFGLS AHPMVAGGRV PLTLRLTSPA GRPIQTTKDL PGFWAGSWTA VAKEMRGRYP RHPWPDDPAA ADPTLRTKKA AQRP
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