Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3443 |
Symbol | |
ID | 5198692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3778880 |
End bp | 3780316 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640582991 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001263927 |
Protein GI | 148556345 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.131083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.673106 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGACTCG ATCCCATCCT TAAAGGCCCA AGACGCATCT TCGCGGCAGC GCGGGCTCGG GCCCTCGGCA GCAGGGCCTC GACCGGATCG CTGACCCGGC GCATGATCTC GATCGCGGCG CTGTGGATCG GCGTGCTGCT GGTCGGCGGC GGCTTCGCGC TCGACCGGGT GCTGAGCGAG GCGATCACCC GTAATTTCGA CGCGCAGCTC GAATATGTGC TCAACGCGAT GATCGCCTCG GCCGAGATCG GGCCCGACGG CGAGGTCCGC TTCAACCGGC CGCTCGGCGA CCAGCGCTTC CTCGAACCCT ATTCGGGGCT CTACTGGCAG GTGTCGGGCC ATGCCCATGA GCCGTTCCGG TCGCGATCGC TGTGGGACCG GGCGCTGCGC CAGGGCGATC CGCACCATGG CCGCACCCTC CACGTCGCCG ACAGCGACGA GTTCGACGGC GAGCCGCTGC GCGTGCTCGA CCGCGAGGTG CGGCTGCCGG GATCGGCGAC CGAATGGCGC TTCCAGGTCG CCGCCAGCCG TGCCGGGCTC AACGACCAGA TCGCGGTGCT GCGGCGGACG CTGGTGCGCT CCTTCGCGAT CCTCGGCCTC GGCCTGCTGA TCCTCGCCGC GCTCCAGGCG ACCTATGGGC TGTGGCCGCT CAGGACGCTG CGCCGGGCGG TGTCGGCGGT AAGCTCCGGC ATCAGCGCGC GGATCGACGC GAAATTCCCC AACGAGGTCC GCCCACTCGT CGAGGAGCTC AACGAGCTGC TCGCCCATAA CGAGCGGCAG GCCGAGGAGG CCCGCCGCCA TGCCGGCAAC CTCGCCCATG CGCTCAAGAC CCCGCTGACC GTGCTGATGA ACGAGGCGAC CGCGAACAGC CCCGAGCTGG CCGAGACGGT GGTGCGGACG ACGATGACGA TGCGCCGCCA GGTCGACCAT CACCTCGCCC GCGCTCGCGC GGTCGGCCGG CGCGCCAACG CCCAGGCGCG CTCCGAGATC TGGCCGTCGC TCAAGGCGGT CGAGCGGGCG ATGGCGCGGA TGCACCGCCA CGTCACCGTC GACCTGGCCG GCGACCAGAA GGCGGTCGCC CATGTCGAGC GGCAGGACCT CGACGAGATT CTCGGCAACC TGATCGAGAA CGCCGCCAAA TATGGCCAGG GCCGCGTCTT CGTCACCGTC TCGCGGGTCG CGACCGACCT GCCCAACGGG CGCAAGGCCG ATTGGGTCGA GCTGCTGATC GAGGACGACG GCCCCGGCAT CCCCGAGGCC GAGCGCGGCA AGCTGTTCGA ACGCGGCGCG CGGCTCGACA CGGGCAAGCC CGGCACCGGC CTCGGCCTCG CCATCGTCCG CGACGTGATC GGCATCTATG GCGGCACGAT CGCGCTGGAG GAGAGCGAGG ACCTGGGGGG ATTGCAGATT CGGGTAAGAT TACCGGCGGC GGTCTGA
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Protein sequence | MRLDPILKGP RRIFAAARAR ALGSRASTGS LTRRMISIAA LWIGVLLVGG GFALDRVLSE AITRNFDAQL EYVLNAMIAS AEIGPDGEVR FNRPLGDQRF LEPYSGLYWQ VSGHAHEPFR SRSLWDRALR QGDPHHGRTL HVADSDEFDG EPLRVLDREV RLPGSATEWR FQVAASRAGL NDQIAVLRRT LVRSFAILGL GLLILAALQA TYGLWPLRTL RRAVSAVSSG ISARIDAKFP NEVRPLVEEL NELLAHNERQ AEEARRHAGN LAHALKTPLT VLMNEATANS PELAETVVRT TMTMRRQVDH HLARARAVGR RANAQARSEI WPSLKAVERA MARMHRHVTV DLAGDQKAVA HVERQDLDEI LGNLIENAAK YGQGRVFVTV SRVATDLPNG RKADWVELLI EDDGPGIPEA ERGKLFERGA RLDTGKPGTG LGLAIVRDVI GIYGGTIALE ESEDLGGLQI RVRLPAAV
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