| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3378 |
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| Symbol | |
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| ID | 5198847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3707098 |
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| End bp | 3708783 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640582924 |
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| Product | ABC transporter related |
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| Protein accession | YP_001263862 |
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| Protein GI | 148556280 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0570219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGGCG GCGATCCGCA GGCCCGCGGC GCGCCCGACT GGCGGGCCTT CGCCCGTCTC
GGCCGTGGCA ATTATCCGTC GCTGCTCGCC GGGACCCTGG CGACCCTGCT GCGCAGCGCC
CTGCTCATCG CGGCCACGCT CGCGATCGCG CGGTTGATGA CGCCGGACGG CGCCCGGCAG
AGCTGGATGC TGGCGGCGGT CGCGGCGGCC TGCACGATCG CCTCGGGCAT CGCCGCCTAT
GCCGCGCGGG CGGTGACGGT GGGCGCGGTC AAGCGCGTGA ACGCGCGGCT GCGCATCGCG
CTGGTCGAAG CCACCCTCGC CTTGCCTTCG GGCGCGGTCG AACGGATCGG CGCGGCACGG
CTGCGGCACA TCCTCGCGCA GGACAGCGAG CGGCTCGACT GCATGGCCAA TGCGTTGCTG
GGGGTGATCC TGCCGGCGAT CGTCACGGCG GTCGCGATCC TCGCGGCCTT GATCTGGATC
GCCCCGCTGG TCGGGCTTTC CGCAGCGCTG CTCTGCGGCT TGCTCGTCCT GTTGCGCCGC
GGCTCGGCCC GCAAGATGCG TCGCCTGGTC GACGAGGCGC AGGAGGCGAT CGAGCGGCTC
GATTCGGGCA TGGCGCTGCT GCTCCATCGC CATGGGCTCG CGCGATCCTC CGCCAGCGAG
GATTTCGAAC GCGCCGAACG GTCGCGCCAG ATCGAGGAGA CGGCGCGGTG GACCGGGACG
ATCGCCAGGC GAATGGCGCG CCTGTCCGAG GTGGAGGGGG CGCGGACCGC GCTCGCCATC
CTGGCGCTCA TCCTGCTCCT CGCCCATGCG CCGGCCGATC TGCTGGCGAT CGACCGGCTG
GCGCCGCTGC TGTTCCTCCT CGTCCTGTTG CGCGGCGCCG TCCAGCAGGC GCAAAGCGCG
GTGCGCGACG TCGATGGCGG TCGTCCTGCG CTCGTCCGCG TCCAGCAACT CCTGGAGCAT
GGGGCGCCCA CGGCGTCGGC GTCCGGCGTC GCGCCACGCG ACTGGATCGT CGAGGCGCGC
GGCATCGCCT TCGGCCATGG CGACGATGCG CTGCTGCGTG GCGTCGACCT GGCGCTGGCG
GCCGGCGAGG TGACGGTCGT GTCGGGCGCC AACGGCACGG GCAAGACGAC CTTCCTCGCC
ATCCTGCTCG GGCTGATCAC GCCGCGATCG GGCGCGGTCT TGGTCGACGG CGTCGATCTG
CGCGAGATCG ACGGCACGAC CTATCGGCGG GGGATCGGCC ATGTCGCCCA GTCGGCGGTC
CTGTTCCCGG GGACGATCGC GGACAATATC GCCTATGGCG ATCCGGCGAT GGCGCGCGCG
ATCGTCCGCC GGGCCGCCGA AGCGACCGGT GTGGCCGGCT TTGCCGACGC CTTGCCGGGC
GGGCTCGATT TCCGCCTGGG CGACGGTGGC GCGCCGCTAT CGGGCGGACA GCGCCAGCGG
ATCGCGCTGG CGCGCGCGCT GGCGCGGCGG CCACGCCTGC TGATCCTCGA CGAGCCGGGC
AACCACCTCG ACGCCGATGC CGTGCAGGGG CTGGTCGCCG CGCTCAGGGC CCTGGCCGAT
GCGCCGGCGG TGCTGATCGT CAGCCATGAT CCGGTGATCA TCGCGGCGGC CGATCATCAT
TATCGGCTGG CCGACGGCAT CCTGCTCGCG CCGGACCGGC CGGCCACCAT ATCCTCCGCC
GCATGA
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| Protein sequence | MLGGDPQARG APDWRAFARL GRGNYPSLLA GTLATLLRSA LLIAATLAIA RLMTPDGARQ
SWMLAAVAAA CTIASGIAAY AARAVTVGAV KRVNARLRIA LVEATLALPS GAVERIGAAR
LRHILAQDSE RLDCMANALL GVILPAIVTA VAILAALIWI APLVGLSAAL LCGLLVLLRR
GSARKMRRLV DEAQEAIERL DSGMALLLHR HGLARSSASE DFERAERSRQ IEETARWTGT
IARRMARLSE VEGARTALAI LALILLLAHA PADLLAIDRL APLLFLLVLL RGAVQQAQSA
VRDVDGGRPA LVRVQQLLEH GAPTASASGV APRDWIVEAR GIAFGHGDDA LLRGVDLALA
AGEVTVVSGA NGTGKTTFLA ILLGLITPRS GAVLVDGVDL REIDGTTYRR GIGHVAQSAV
LFPGTIADNI AYGDPAMARA IVRRAAEATG VAGFADALPG GLDFRLGDGG APLSGGQRQR
IALARALARR PRLLILDEPG NHLDADAVQG LVAALRALAD APAVLIVSHD PVIIAAADHH
YRLADGILLA PDRPATISSA A
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