| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3288 |
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| Symbol | |
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| ID | 5198787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3618469 |
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| End bp | 3619263 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582833 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263772 |
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| Protein GI | 148556190 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.197949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAC TCGCAGGCAA GGTAGCGATC ATCAGCGGCG CGGCACAGGG CATGGGCGCG
GCGACCGCAC GCCTGTTCGC GGCCGAAGGG GCGAAGGTCG TCATCGGCGA CGTGCTCGAC
GAGAAGGGCC GCGCGGTCGC GGCCGAGCTC GGCGCCGACG TCGCGCTCTA CCAGCATCTC
GACGTGCGCG AGGAGGAGCA GTGGGCGGCG ATCGTCAAGG CCGCCGTCGA TCGGTTCGGC
AAGCTCGACA TCCTCGTCAA CAACGCCGCC GTCACCCATT TCGGCGCGTC GGAGGAGCTG
CGCAAGGAGG ATGCGGAGCG CGTGCTCGGC ATCAACCTGA TCGGCACGAT GATGGGCGTG
AAGCATGCGG TGCCCGCGCT CAAGGCCAAT GGCAGGGGGG TGATCGTCAA CATCTCCTCG
GTCGACGGCT TGCGCGGCTG CAACGGCCTG GTCGCCTATA CCGCCAGCAA ATGGGCGGTG
CGCGGCATCA CCAAATCCTA TGCCTATGAA TTCGGCCCGC TCGGCATCCG CGTCGTCTCG
ATCCATCCGG GCGGCGTCAA CACCGAGATG GGCAATCCGG GGCACGAGTC GGTCGAGACC
GTCAATGCCC GCTCGTTCGG CCGGGTGCCG CTGCAGCGGA TCGGCGAGCC CGAGGAGATC
GCCCGCGCGA CCCTGTTCGT GTGCAGCGAC GAGGCGAGCT ACATCTCGGG CGCCGAGATC
GCCGTCGACG GCGGCTGGAC CGCGGGCCAT TACGAGCCGG CGCTGCCCGG CTGCCCCGAC
CATCTGAGGG GCTGA
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| Protein sequence | MARLAGKVAI ISGAAQGMGA ATARLFAAEG AKVVIGDVLD EKGRAVAAEL GADVALYQHL
DVREEEQWAA IVKAAVDRFG KLDILVNNAA VTHFGASEEL RKEDAERVLG INLIGTMMGV
KHAVPALKAN GRGVIVNISS VDGLRGCNGL VAYTASKWAV RGITKSYAYE FGPLGIRVVS
IHPGGVNTEM GNPGHESVET VNARSFGRVP LQRIGEPEEI ARATLFVCSD EASYISGAEI
AVDGGWTAGH YEPALPGCPD HLRG
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