Gene Swit_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3286 
Symbol 
ID5198785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3616335 
End bp3617501 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content69% 
IMG OID640582831 
Producthypothetical protein 
Protein accessionYP_001263770 
Protein GI148556188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.198944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAG TGAGCGATCG GGCGACGCTG GCCGCCCGCG CCGAGCAGGC CACCGGGCTC 
CACGATTTCG GCGATCCCTG GATCTTCGAG AATCTCGACG CGCTGATCCC GGTGCTGAAC
GACGAGGCCG AGCTGACCGA GGTCGGCGTC GCCGGCGCCG AGACGATGAT CGTCACCGCG
CTCGCCAACC GGCTGCGCCA TGCCGACCTG ATCAAACGCC ACCCCGAGAT CCTCGACGAG
CGGGTCGACG TCGCGGCGGT CGTCGTCGGC CTGCCCCGCA CCGGCAGCAC GATGCTCCAC
CGCATGCTGT CCTCGGCCCC CGGCATGACC GGGGTGAAAT GGTGGGAGGC GCAGAACTAC
GCCCCCTTCC CCGGCGAGGA GCGCGGCAAG CCCGACGCGC GGCGCGAGGC GGCGAGCCAT
TACATGGCCT ATATGCTCGA GCATGCGCCC GAGCTGATGT CGATCCACCC GATGAGCATC
GACCAGTCGG ACGAGGAGCT GATCATCCTC GGCCTGCTCT TCTCCTCGAC GATGATCGAG
GGGATGTACC ATGTGCCGAG CTATGCCCGC TGGCTGGTCG AGAACAGCCG CACCCGCTGC
TATGCCGACC TCAAGCAGAT CCTCCAGTCG CTGCAATGGC AGGACCCGGC GCGGCGCGGG
GCGAAGTGGG TGCTCAAGAC GCCGGGCCAC CTGATGGCGC TCGACGGCGT GCTGGAGACC
TTCCCCGAGG CGAAGGTGGT GATGACGCAC CGCGACCCGG TGCAGACCGT GCCGTCCTAC
TGCTCGATGA TGACGACGCT CTACCACATG GCCTCGACCG TCGACCGGCG GAAGATCGGC
GCCTTCTGGG AGAAGCGGCT CGCCGAGCTG CTCGACCTGT TCATGGCGGT GCGCGCGCGG
GCCGGCTCGG CCAGCTTCAT CGACGTCCGC TACACCGACA CGACGACCCG GCCGGTCGAG
GAAGGCCGCC GCGTGCTGGG CGAGGCGGGG ATCGCGGTCA CCCCCGAGAT CGTCGCCGGC
ATGGCCGAGT GGGTCGAGGC GAACAAGCGC GAGGACCGCG CGCCGCACCG CTATGCGCTC
GAGGATTTCG GGCTGACCCG CGAGCAGGTC GAGCAGGACT TCGCCGACTA TCGCGCGACC
TATCTGGGCG AGAGGGCGGC GGCATGA
 
Protein sequence
MSRVSDRATL AARAEQATGL HDFGDPWIFE NLDALIPVLN DEAELTEVGV AGAETMIVTA 
LANRLRHADL IKRHPEILDE RVDVAAVVVG LPRTGSTMLH RMLSSAPGMT GVKWWEAQNY
APFPGEERGK PDARREAASH YMAYMLEHAP ELMSIHPMSI DQSDEELIIL GLLFSSTMIE
GMYHVPSYAR WLVENSRTRC YADLKQILQS LQWQDPARRG AKWVLKTPGH LMALDGVLET
FPEAKVVMTH RDPVQTVPSY CSMMTTLYHM ASTVDRRKIG AFWEKRLAEL LDLFMAVRAR
AGSASFIDVR YTDTTTRPVE EGRRVLGEAG IAVTPEIVAG MAEWVEANKR EDRAPHRYAL
EDFGLTREQV EQDFADYRAT YLGERAAA