Gene Swit_3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3266 
Symbol 
ID5198720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3596421 
End bp3597482 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content66% 
IMG OID640582811 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001263750 
Protein GI148556168 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0113117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTCCA CGTTCGAATG TCTCAAGCGG GCCTGGTACG TCGCCGCCAT GTCGTCCGAA 
GTGGAGGGCG AGGCGCTGTT CCACCGCCGC ATCCTCGGCA CCTCGGTGAT GATCTACCGG
CTGGCCGACG GGACGCCGGT GGCGATGCAC GACCGCTGCC CCCACCGCTT CGCGCCGCTG
CACCTGGGCC AGCGGGAAGG CGACGAGATC GCCTGCCGCT ATCATGCGCT GCGCTTCGAC
GCCGATGGCC GCTGCACCCA CAATCCGCAC GGCAACGGCC GTATCCCGGA CGCCGCGCGG
GTCCGCCGCT TCCCGCTGCT CGAACGCTAT GGCTTCCTGT GGATCTGGAT GGACGACTCC
GATCCCGATC CTGCGCTGCT GCCCGATTTC TCGCCGCTGG AGGAGGGGCA CCCCAATGCC
GTCGCGCAGA CCTACATGCA CATGGACGTC AACTATGAGC TGATCATCGA TAATGTGATG
GACCTCAGCC ATATCGACCA TGTCCATGGC GAGATCATCA CCACCCGTGG CCAGCTCTCG
CCGGTCGTTC CCAAGGTGCG CGAGCGGGAC ACGCATATCT CGGCCCGCTG GGAATGGTCG
CAGACGCCGG CGATGATGAT CTTCGCCCCC TTCCTGCCGC GCCCCGAGGA CGCGGCGCGC
CATTATTTCG ACATCAGCTG GACGGCGCCC GCCAATATCC AGCTATCGGT GGGGGCGGTG
CAGGACAGCG ACGATTTCGG CGACGCGACC AGCCAGTACG ACCTCCACAC CTGCACGCCC
GAGGACGCGT TCAAGACCCA TTATTTCTTC GCGACCCGCC GCAACCACAT CGTCGACGAC
GCCGACTATA ACCGCAAGAA GATCGAGGCG ATGCACGCGG CGTTCGAGAC CGAGGACGGA
CCGATCATCA CCGCCGTGCA GGAGGAGATG GGCGAGGCGG AATTCTTCTC GCTCGACCCG
GTGCTGATGT CGAACGACGT GGCGCCGGTG AAGGTGCGCC GCCGGCTGCG CAGGATGATC
GTCGAGGAGC AGGCGGCGGC GGCGGCGGCG GATGCCGCCT GA
 
Protein sequence
MGSTFECLKR AWYVAAMSSE VEGEALFHRR ILGTSVMIYR LADGTPVAMH DRCPHRFAPL 
HLGQREGDEI ACRYHALRFD ADGRCTHNPH GNGRIPDAAR VRRFPLLERY GFLWIWMDDS
DPDPALLPDF SPLEEGHPNA VAQTYMHMDV NYELIIDNVM DLSHIDHVHG EIITTRGQLS
PVVPKVRERD THISARWEWS QTPAMMIFAP FLPRPEDAAR HYFDISWTAP ANIQLSVGAV
QDSDDFGDAT SQYDLHTCTP EDAFKTHYFF ATRRNHIVDD ADYNRKKIEA MHAAFETEDG
PIITAVQEEM GEAEFFSLDP VLMSNDVAPV KVRRRLRRMI VEEQAAAAAA DAA