| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3257 |
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| Symbol | |
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| ID | 5197049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3586507 |
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| End bp | 3587130 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582802 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001263741 |
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| Protein GI | 148556159 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000255027 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000226088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCGGCT TGGCCAGACG GACGCAGGAG CGAGGACGGA CGCGCAGGGC CGCATTGGTC
GAAGCGAGTC GGAAGCTGTT GCGGGCCCGT GAGATCGACG AGATCTCGCT GACCGACATC
GCCGAGGAAG CCGGCATCCC GAAAAGCTCG GCCTATCATT TCTTCTCGCA CGTGCTCGAA
GTGTTCGAGG CCGCGGCCGG CGACATAGAG GCCGAGCTCC AGGCCTGGCT GGAGGAGCTG
TCGACCGAGG GCTGCAGCGA CTGGCGGCAG GTCGTCACCC GTTTCACCGG CCGGGGCGCG
GCCTATTTCA ACGGCAATCG CGACGCGATG CAGCTCCTGA TCGGCCCGAA GAGTCCGGCG
GCGATCAAGC TGAAGGACCG GCAGAACGAC TTCGCGATCG CGGCCCAACT CAAGGACGAT
ATCTCCGCGC ATTTCCAGCT TCCCGAGCTG GCCGACACGC CCGAGATCTT CTTTCGCGGA
ATCGAGATCG CCGACCTGTT CTTCGGCCTG TCGGTGATCC GGCACGGCCA CATCACCGAC
GATTTCGACC GCGAGGCGGC GCGCGCCACC TGCGCCTATC TGTCGCTCTA CCTGCCCGTC
GTCCTGCCGC GCGCGGCGGC TTGA
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| Protein sequence | MIGLARRTQE RGRTRRAALV EASRKLLRAR EIDEISLTDI AEEAGIPKSS AYHFFSHVLE
VFEAAAGDIE AELQAWLEEL STEGCSDWRQ VVTRFTGRGA AYFNGNRDAM QLLIGPKSPA
AIKLKDRQND FAIAAQLKDD ISAHFQLPEL ADTPEIFFRG IEIADLFFGL SVIRHGHITD
DFDREAARAT CAYLSLYLPV VLPRAAA
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