| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3235 |
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| Symbol | |
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| ID | 5196812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3557109 |
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| End bp | 3558899 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582780 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001263719 |
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| Protein GI | 148556137 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.19985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCCGT TGGAGCCTAC CAACATCGAG GCGCCGGAAT ATTTCCATAA GGTCGTCGAT
TGCCAATGGG CCTGCCCGGC CCACACACCC GTCCCGGAAT ATATCCGCCT GATCGCGCAG
GGGCGTCATG CCGACGCCTA TATGGTCAAC TGGAAATCGA ACGTCTTCCC GGGAATCCTC
GGCCGGACCT GCGACCGCCC GTGCGAGCCG GCGTGCCGGC GCGGCCGGGT CGACGAGGAG
CCGGTGGCGA TCTGCCGATT GAAGCGGGTC GCCGCCGACA ACAAGGGCGA TGTCGCCGCG
CGCATGCCGC AGCCGCCGAA GAAGCGGATC GGCAAGAAGG TCGCCTGCAT CGGCGCCGGG
CCCGCCTCGA TGACGGTGGC GCGCGATCTC GCCCCGCTCG GCTACGACGT CACCGTCTAC
GACGCCGACG CCAAGGCGGG CGGCATGATC CGCAGCCAGA TCCCGCGCTT CCGCCTGCCG
GAAAGCGTGA TCGACGAGGA GATGGGCTTC ATCACCGCGC TGGGCCCGAG GATGCGGCTC
AACCGGCGGG TCGACAGCCT CGCGGCGCTG CTGCGCCGGG ACTATGACGC GATCTTCGTC
GGCACCGGCG CGCCGCGCGG CCGCGACCTC GACATCCCCG GCCGCGCCGA GGCCGCCGCC
AACGTCCATA TCGGCATCGA CTGGCTCGCC AACGTCTCGT TCGGCCATGT CGACACGATC
GGCAAGCGGG TGATCGTGCT CGGCGGCGGC AACACCGCGA TGGACTGCTG CCGCACCTCG
CGCCGGCTCG GCGGCGGCGA GGTCAAGGTC ATCGTCCGGT CGGGCTATGA CGAGATGAAG
GCGTCGCCCT GGGAGAAGGA GGACGCCCAG CACGAGGGCA TCCCGATCCT CAACTATCTG
GTCCCCAAGG CCTTCACCCA TGCGGACGGC CGGCTGACCG GCGTCACCTT CGAGAAGGTC
GCGCCGGTGG TCGACGAGCA GGGCCGCCGC CGGCTCGAAC CGACCGGCGA GCCCGACGAG
CATCACGAAT GCGACGACGT GCTGGTCGCG ATCGGGCAGG AGAACAGCTT CCCCTGGATC
GAGCGCGACA TCGGCCTCGA CTTCGACAAA TGGGGCATGC CCGTCGTCGA CGAGACGACC
TTCCAGTCGA CCCACCCCAG GGTGTTCTTC GGGGGCGACG CCGCCTTCGG GCCGAAGAAC
ATCATCTGGG CGGTCGCGCA CGGCCATGAG GCGGCGATCT CGATCGACCA TCATTGCCGG
GGCGCCGACC TGCGGCTGCG GCCGCCGCCC GGCGTGCGGG TGTCGTCGCA GAAGATGGGC
ATCCACGAGT GGAGCTACGA CAACGACGTC TCGCCCGAGG ACCGGCAGAA GGTGCCGCTG
CTGCCGCTGG CCGAGGCGCT GGGCGACGTC AAGGCCGAGG TCGAGCTGGG CTTCGACGAC
CCGCGCAGCT GGGCGGAGAC GCAGCGCTGC CTCAACTGCG ACGTGCAGAC CGTGTTCACC
CGGACGCTGT GCATCGAATG CGACGCCTGC GTCGACATCT GCCCGACCGA CTGCATCACC
TTCACCGTCA ACGGCGACGA GGCCGAGCTG CGGCCCCGGC TCAAGGCGCC GGCGACCAAT
CCCGATCAGG CGCTCTACGT CTCCTCGACC CTGCCGACCG GCCGGGTGCT GGTGAAGGAC
GAGGACGTCT GCCTGCACTG CGGCCTGTGC GCCGAGCGCT GCCCGACCGG AGCCTGGGAC
ATGCAGAAGA CGCTGGTCGA GATGAGCCAT GCGGGAGGGT GCGCGCGATG A
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| Protein sequence | MSPLEPTNIE APEYFHKVVD CQWACPAHTP VPEYIRLIAQ GRHADAYMVN WKSNVFPGIL
GRTCDRPCEP ACRRGRVDEE PVAICRLKRV AADNKGDVAA RMPQPPKKRI GKKVACIGAG
PASMTVARDL APLGYDVTVY DADAKAGGMI RSQIPRFRLP ESVIDEEMGF ITALGPRMRL
NRRVDSLAAL LRRDYDAIFV GTGAPRGRDL DIPGRAEAAA NVHIGIDWLA NVSFGHVDTI
GKRVIVLGGG NTAMDCCRTS RRLGGGEVKV IVRSGYDEMK ASPWEKEDAQ HEGIPILNYL
VPKAFTHADG RLTGVTFEKV APVVDEQGRR RLEPTGEPDE HHECDDVLVA IGQENSFPWI
ERDIGLDFDK WGMPVVDETT FQSTHPRVFF GGDAAFGPKN IIWAVAHGHE AAISIDHHCR
GADLRLRPPP GVRVSSQKMG IHEWSYDNDV SPEDRQKVPL LPLAEALGDV KAEVELGFDD
PRSWAETQRC LNCDVQTVFT RTLCIECDAC VDICPTDCIT FTVNGDEAEL RPRLKAPATN
PDQALYVSST LPTGRVLVKD EDVCLHCGLC AERCPTGAWD MQKTLVEMSH AGGCAR
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