| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3207 |
|---|
| Symbol | |
|---|
| ID | 5197849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3524071 |
|---|
| End bp | 3526503 |
|---|
| Gene Length | 2433 bp |
|---|
| Protein Length | 810 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640582753 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001263692 |
|---|
| Protein GI | 148556110 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.306587 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAGG CACCGCATCC GCTGGATCGC TGGCGGGCCG CGAACGCGGC CGAGGCGGAT
GCCGTTCGCG CCGCCGCCGC GACCGATGCG CCCACCGAAG AGACATCCGC GCAAGAGGGC
GCCGAAGACG GTGCCGACGC GGACGAGCTG CTGCTCGGCG CGCCCGACGA CGGAGCGCCG
GTGCTGCCGG CCCGGCGCGG CGGGGACATC GCGATCGGCG CGGCCCTCGG CCTGATCGGC
GCGGGCTGGA TCGGTTTCCT GGTCGGCGGC GTGGTGCCGA CCACGCCCGA CCTGCCCGCC
ATCGCCAACA GCATCGCGCT GGCCTGCGGC CCGCTCGCGC TGCTCGGCAT CCTCTACATA
TTGTTCCAGC GCGGCGCGCG GCGCGAGGCG GCCCGTTTCG GCGGGACGGC GCTGTCGATG
CGGGTCGAGG CCCGCCGGCT CGAGGAAGCG GTCGCCCGGG TCACCGCCGC GCTCGACGAA
CGGCGCGACG CGCTGGGCAG CCACACCGCC GGCCTGCTCG ACGAAGGCCA GCGCGCGGCC
GAGAAGCTGC AGCAGATCAG CATGGACATG CGCGACGAGA CCGACCTGCT CGCGCGCCAG
ACCGAGCTGC TCCACAACGC CGCAGGGATC GCCCGATCGG ACATGAGCGG GCTGATGCTC
GACCTGCCGC GCTCGCTCGA CATGGTCAAG GAAGTGTCCG ACCTGATCGG CTCGATCGGC
GGATCGGCGC GCGACCATGC CCAGGGCCTG TCCGACGCGC TGTCGGCGAT CATCGCGCGC
AGCCATGAGG CGGACGAGAT GATCGGCGCC GCGTCGGGCC GGCTCGCCAC CCAGATCGGC
CGGATCGAGA CCCGCACCGA ACGCACCACC CGCACGATCG AGGAGACCGC TTCCGCGCTC
GGCCATGTGA TCGACGCGAC GCTCGACAAG ACCGCGCTGG CGATTGAGCA GACCCGCACC
GGGCTCGACG CGCAGCGCGC GGCGATGGCG GCGATGATCG ACCATGGCCG CGCCGCGCTG
GACGAGGCCG GCACCGCCGC CGCCGCCTCG ATCGCGCAGC GGCTGACCGA CATGAGCGGG
CTGTCCCAGA CGCTGTCGCA GCAGCTCGCC CAGCAGGACG AGGACGCCCG CCGGCTGTTC
GCCAATCTCG AACATGCGCT GGGCGCGATC GAGAGCCGGT TCGAGGCGCT CGGCGCGACC
GGCACCGAGC AGACCGCCGA CCTCGCCGAA CTGATCGTCA CGCTGAGCGA GCATGCCGAC
GGCCTCGGCC AGGCGGTGAC CAACAGCCTG GCCGGCGCGC GCACCCTGAC CGACCGCGCC
AACGCGCTGC GCATCGCCTT CGACGCGATC ATCGGCAATG TCGAGCGCGA CCTGCCGCAG
GTGATGAGCA AGGTGGAGAG CGAGGCCGCG CGCGGCGACG CGACGATGCG CGCCGTCACC
GCCCAGGCCG AGCAGCTCAA CCAGACCGTC GAGCGCGCGA CCGACCGGCT CGGCTCGGCC
GACACGATGA TCGACCGGCA GCGCGAGGCG ATCGCCGGGC TGGGCGACCT CGCCGCCCGC
CGCATGGCCG GGATCGCCGC CGAGGGCGAC GCGCTGCTCG AACGGCAGCG GGCGCTGTCC
GACGCCTTCG CCGAGGAGGC CAATGCCCGG CTGGAGGCCC TGCGCGACCA TTCGAACGAG
CTCGGCCGCC TGATCGGCGA GAGCGAGGCG AACATGCGGT CGCTGTCGGA GCTGTCGGGC
AGCCGGCTGA TCGACGCGAT CCTCAAGGTG CGCGAGACCG CGTCGGAGGC GGCGCGCGGC
GCCCGCGAGG CGCTCGAATC GATCATCCCC GACGCCAGCG AGAAGCTGGC GCGCAGCGGC
GCCGAGGCGA TCGAGCGCGC CTTCGGCGAC CAGATCACCC AGCGCATCCA CCTGATCTCC
GACACCGCCG AGGCCGCCGT CGCCGCCGCC AACCTGGCGA GCGAGCGGCT GCTGACGCAG
ATGCTGTCGA TCACCGAGGC CGCAGCCTCG ATGGAGAAGC GCGTCGCCGA TGCCGAGATC
CAACAGGAGC ATGTCTCGCA GGAGGCGGTC AGCCGCGAGG TCGCGATCCT GATCGAGCAT
CTCAACTCGG CGGCGATCGA CGTCGCCAAG CTCCTGTCGC ACGACGTGCC CGACGGCGCC
TGGAAGGCCT ATCTCCACGG CGACCATGGC GCCTTCACGC GCGCCGCCGT CCGCCTGCTC
CGCCGCGACG AGGCGGCCGG CATCGCCCAG CTCTACGACG GCGACGGCGA GTTTCGCGAG
CATGTGAACC GCTACATCCA CGACTTCGAG GCGCTGCTGC GCCGCGTGCT CGCCAGCCGC
GACGGCGGCG CGCTGGCGAT GACGGTGCTG TCGTCCGACA TGGGCAAGCT CTACGTCGCG
CTCGCCCAGG CGATCGAGCG CCTGCTGATC TGA
|
|---|
| Protein sequence | MGKAPHPLDR WRAANAAEAD AVRAAAATDA PTEETSAQEG AEDGADADEL LLGAPDDGAP
VLPARRGGDI AIGAALGLIG AGWIGFLVGG VVPTTPDLPA IANSIALACG PLALLGILYI
LFQRGARREA ARFGGTALSM RVEARRLEEA VARVTAALDE RRDALGSHTA GLLDEGQRAA
EKLQQISMDM RDETDLLARQ TELLHNAAGI ARSDMSGLML DLPRSLDMVK EVSDLIGSIG
GSARDHAQGL SDALSAIIAR SHEADEMIGA ASGRLATQIG RIETRTERTT RTIEETASAL
GHVIDATLDK TALAIEQTRT GLDAQRAAMA AMIDHGRAAL DEAGTAAAAS IAQRLTDMSG
LSQTLSQQLA QQDEDARRLF ANLEHALGAI ESRFEALGAT GTEQTADLAE LIVTLSEHAD
GLGQAVTNSL AGARTLTDRA NALRIAFDAI IGNVERDLPQ VMSKVESEAA RGDATMRAVT
AQAEQLNQTV ERATDRLGSA DTMIDRQREA IAGLGDLAAR RMAGIAAEGD ALLERQRALS
DAFAEEANAR LEALRDHSNE LGRLIGESEA NMRSLSELSG SRLIDAILKV RETASEAARG
AREALESIIP DASEKLARSG AEAIERAFGD QITQRIHLIS DTAEAAVAAA NLASERLLTQ
MLSITEAAAS MEKRVADAEI QQEHVSQEAV SREVAILIEH LNSAAIDVAK LLSHDVPDGA
WKAYLHGDHG AFTRAAVRLL RRDEAAGIAQ LYDGDGEFRE HVNRYIHDFE ALLRRVLASR
DGGALAMTVL SSDMGKLYVA LAQAIERLLI
|
|---|
| |