Gene Swit_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3122 
Symbol 
ID5197866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3431579 
End bp3431842 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content58% 
IMG OID640582670 
Producthypothetical protein 
Protein accessionYP_001263609 
Protein GI148556027 
COG category[S] Function unknown 
COG ID[COG3750] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.59002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG CCGACACGAC CGAAGACAAG GGCAGCATCG CGGCGCAGGA GCTGCGCCTG 
TTCGTCGAAC GGGTCGAACG GCTCGAGGAA GAGAAGAAGG GCATCGCCGA CGACATCAAG
GACGTCATGT CGGAGATGAA GGGCCGCGGC TACGACACCA AGATCGTCCG CAAGCTGATC
TCGATCCGCA AGAAGAAGAA GGGCGAGCAT GAGGAAGAGG CGATGATCCT CGAAACCTAC
ATGGCTGCTC TTGGTATGAT TTAG
 
Protein sequence
MAEADTTEDK GSIAAQELRL FVERVERLEE EKKGIADDIK DVMSEMKGRG YDTKIVRKLI 
SIRKKKKGEH EEEAMILETY MAALGMI