| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3107 |
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| Symbol | uvrA |
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| ID | 5200350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3416276 |
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| End bp | 3419242 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582655 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_001263594 |
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| Protein GI | 148556012 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.378595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACTC ATATTTCGGT GCGCGGCGCG CGCGAGCACA ACCTCAAGGG CGTCGATGTC
GAGCTGCCCC GCGACCGGCT GATCGTGATC ACCGGCCTGT CCGGATCGGG CAAGTCGAGT
CTCGCCTTCG ACACCATCTA TGCCGAGGGG CAACGCCGCT ACGTCGAGTC GCTGTCGGCC
TATGCGCGCC AGTTCCTCGA GCTGATGCAG AAGCCCGACG TCGACCATAT CGAGGGCCTC
TCCCCCGCCA TCTCGATCGA GCAGAAGACG ACCAGCCGCA ACCCGCGCTC GACCGTCGCG
ACGGTGACCG AGATCTACGA CTATATGCGC CTGCTCTGGG CGCGGGTTGG CGTGCCCTAT
TCGCCCGCGA CGGGCCTGCC GATCTCGGCG CAGACGGTCA GCCAGATGGT CGACCGCATC
CTGCAATTGA AGGAGGGCAC CCGCTTCCTG CTGCTCGCCC CGGTCGTGCG CGGCCGCAAG
GGCGAGTATC GCAAGGAGCT GGCCGAATGG CAGAAGGCCG GCTTCACCCG CGTCCGCATC
GACGGCGAGA TGCACGAGAT CGAGGCGGCG CCCGCGCTCG ACAAGAAGTA CAAGCACGAC
ATCGAGGTGG TGGTCGACCG CCTCGTCGTC CGCGAGGGGA TGGAGACCCG CCTCGCCCAG
AGCCTGGAGA CCGCGCTGCG CCTGGCCGAC GGCCTGGCCT ATGCCGACCT GGTCGACACG
ACGGTGGCGG AGGCGATGGC ACCGAGCGGC GTCCGCGAGA TGCCGGCCAG CTTCCAATAT
GCCGAGACGA TGGAGACGGG CGGCGCGATG AAGGGCGCCG GCGTTCCCGC CAACCGCATC
ACCTTCTCGG AGAAATTCGC CTGCCCCGTC TCGGGCTTCA CCATCGCCGA GATCGAGCCG
CGGCTGTTCT CGTTCAACGC GCCGCAGGGC GCCTGCCCGG CCTGCGACGG CCTCGGCGAG
AAGCTCTATT TCGACCCGCA GCTCGTCGTC CCCAACGAGG CGCTGTCGAT CAAGCAGGGC
GCGGTGGTGC CCTGGGCCAA GTCCAACCCG CCCAGCCCCT ATTACATGCA GGTACTGAGC
TCGGTCGCGC GCGCCTACGG CTTCAAGCTG GAGACGCCGT GGAACGAGCT GCCCGAGGAG
ATCCGCGATA CCGTCCTCTA CGGCACCAAG GGGCGGGTGA TCACCCTCAC CTTCATCGAC
GGCCGCAAGA GCTACGACGT GCAGAAGCCG TTCGAGGGGG TGATCCACAA TCTCGAGCGC
CGCATGCTGT CGACCGAGAG CGCCTGGATG CGCGAGGAGC TCGCCAAGTA TCAGAGCGCC
GCGCATTGCG AGGTGTGCGG CGGCGCGCGC CTCAAGCCCG AGGCGCTGGC GGTCAAGATC
GCGGGCGAGG ACATCTCGAT GTCGACCCGC CGCGCGGTCG GCCCCGCGCT CAAATTCTTC
CGCGAGATGC CCGACCATCT CAACGAGCAG CAGAAGGCGA TCGCCGAGCG CATCCTCAAG
GAGATCGTCG AGCGGCTGGG CTTCCTCGAC AATGTCGGGC TCGACTATCT CAACCTCGAC
CGCACCTCGG GCACGCTGTC GGGCGGCGAG AGCCAGCGCA TCCGCCTCGC CAGCCAGATC
GGGTCGGGAC TTTCCGGCGT CCTCTACGTG CTCGACGAGC CGTCGATCGG CCTGCACCAG
CGCGACAACG ACCGGCTGCT GGTGACGCTG CGGCGGCTGC GCGACCTCGG CAACACGGTG
ATCGTCGTCG AGCATGACGA GGATGCGATC CGCACCGCCG ACTATATCCT CGACATGGGG
CCGGGCGCCG GCGTCCATGG CGGCGAGGTG GTGGCGTCGG GCACGCTCGA CGACATCCTC
GCCAACGAGG CGAGCCTAAC CGGCGACTAT CTGTCGGGCC GCCGCATGGT CGAGGTGCCG
GCGAAGCGGC GCAAGGGCAA CGGCAAGAAG GTCACCGTCC ACAATGCGCG GGCGAACAAC
CTGAAGAATG TCACCGCGGC GATCCCGCTC GGCACCTTCA CCTGCATCAC CGGCGTCTCG
GGATCGGGCA AGTCGAGCTT CACGATCGAC ACGCTCTACG CCTCGGCCGC GCGCCAGCTC
AACGGCGCGC GCGTGGTGGC GGGCGCGCAC GACAAGATCA CCGGTCTGCA ATATTGCGAC
AAGGTCATCG ACATCGACCA GTCGCCGATC GGCCGCACCC CGCGCTCGAA CCCGGCGACC
TATACCGGCG CCTTCACCAA CATCCGCGAC TGGTTCGCGG GGCTCCCGGA GAGCGAGGCG
CGCGGCTACA AGCCGGGCCG GTTCAGCTTC AACGTCAAGG GCGGCCGCTG CGAGGCGTGC
ACCGGCGACG GCCTGCTCAA GATCGAGATG CACTTCCTGC CCGACGTCTA CGTCACCTGC
GACGTCTGCC ACGGCGCGCG CTACAACCGC GAGACGCTGG AGGTGAAGTT CAAGGACAAG
AGCATCGCCG ACGTGCTCGA CATGACCGTC GAGGACGCGG TCGAGTTCTT CAAGGCGGTC
CCGCCGATCC GCGACAAGAT GGCGATGCTG GCCGAGGTCG GCCTCGGCTA CATCAAGGTC
GGCCAGCAGG CGACGACGCT GTCGGGCGGC GAGGCGCAGC GCGTCAAGCT CGCCAAGGAA
CTGTCGCGCC GGTCGACCGG CAACACCCTC TACATCCTCG ACGAGCCGAC CACCGGCCTC
CACTTCGAGG ACGTCCGCAA GCTGCTCGAA GTGCTCCACG CGCTGGTCGA GCAGGGCAAC
ACCGTGGTGG TGATCGAGCA CAACCTCGAG GTCATCAAGA CCGCCGACTG GGTGATGGAC
CTCGGCCCCG AGGGCGGCGT GCGCGGCGGC GAGATCGTGG CGGAAGGGAC GCCGGAGCAG
GTGGCGAAGG AGCCGCGCAG CTACACGGGC GCCTATCTCA AGCCGCTGCT GGAGGCAGGG
GCGAGGAGTG CTCAGGCTGC CGAATAG
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| Protein sequence | MLTHISVRGA REHNLKGVDV ELPRDRLIVI TGLSGSGKSS LAFDTIYAEG QRRYVESLSA
YARQFLELMQ KPDVDHIEGL SPAISIEQKT TSRNPRSTVA TVTEIYDYMR LLWARVGVPY
SPATGLPISA QTVSQMVDRI LQLKEGTRFL LLAPVVRGRK GEYRKELAEW QKAGFTRVRI
DGEMHEIEAA PALDKKYKHD IEVVVDRLVV REGMETRLAQ SLETALRLAD GLAYADLVDT
TVAEAMAPSG VREMPASFQY AETMETGGAM KGAGVPANRI TFSEKFACPV SGFTIAEIEP
RLFSFNAPQG ACPACDGLGE KLYFDPQLVV PNEALSIKQG AVVPWAKSNP PSPYYMQVLS
SVARAYGFKL ETPWNELPEE IRDTVLYGTK GRVITLTFID GRKSYDVQKP FEGVIHNLER
RMLSTESAWM REELAKYQSA AHCEVCGGAR LKPEALAVKI AGEDISMSTR RAVGPALKFF
REMPDHLNEQ QKAIAERILK EIVERLGFLD NVGLDYLNLD RTSGTLSGGE SQRIRLASQI
GSGLSGVLYV LDEPSIGLHQ RDNDRLLVTL RRLRDLGNTV IVVEHDEDAI RTADYILDMG
PGAGVHGGEV VASGTLDDIL ANEASLTGDY LSGRRMVEVP AKRRKGNGKK VTVHNARANN
LKNVTAAIPL GTFTCITGVS GSGKSSFTID TLYASAARQL NGARVVAGAH DKITGLQYCD
KVIDIDQSPI GRTPRSNPAT YTGAFTNIRD WFAGLPESEA RGYKPGRFSF NVKGGRCEAC
TGDGLLKIEM HFLPDVYVTC DVCHGARYNR ETLEVKFKDK SIADVLDMTV EDAVEFFKAV
PPIRDKMAML AEVGLGYIKV GQQATTLSGG EAQRVKLAKE LSRRSTGNTL YILDEPTTGL
HFEDVRKLLE VLHALVEQGN TVVVIEHNLE VIKTADWVMD LGPEGGVRGG EIVAEGTPEQ
VAKEPRSYTG AYLKPLLEAG ARSAQAAE
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