Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3067 |
Symbol | |
ID | 5197228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3364658 |
End bp | 3366115 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582616 |
Product | succinate semialdehyde dehydrogenase |
Protein accession | YP_001263555 |
Protein GI | 148555973 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.417891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGATC GCCACGCCTA TCCAGCGCCA CGCTTGTTCA TCGATGGGGA GTGGATCGAC GCCGGCGATC GCGACACCCT GCCGATCGCG AACCCGGCGA CCGGGGAAGC GATCGGACGC TTGCCGGTCG CGACGCGCGC CGATCTCGAT CGCGCGCTCG ACGCCGCGCG GCGGGGCTTT GTGGTCTGGC GCGCCAAGAC CGCGCTGGAG CGCGCGGCGA TCCTGCATCG GGCGGCCGGG TTGTTGCGCG AGCGCGCCGA CGAGATCGGC CGGCTTTCGA CCATCGAGCA GGGCAAGCTG GTGGGCGAGT CGATCGCCGA GGCGCAGGCG AGCGCCGATA TCTTCGACTG GTTCGCCGAG GATGCGCGCC GCGACTATGG GCGCATCGTG CCGTCGAAGC AGCCGGCCGT CCGGCATTTG GTCGTGCACG AGCCGATCGG TCCCGCCGCG CTGTTCACGC CCTGGAACTT CCCGGTGACG ATCCCGGCAC GCAAGCTGGC GGCGGCGCTG GCCGCCGGCT GCTCGGTGGT GATCAAGCCC GCCGAGGAAA CGCCGATGAG CTGCCTGGAA CTGGCGCGGG CGCTCGACGA CGCCGGATTG CCGAAGGGCG TGCTCAACGT GGTGTTCGGC CTGCCGGCCG AGATCTCCGA CTATCTGATC CGCTCCCCCG TCATCCGCAA GGTCAGCTTC ACCGGCTCGA CCGGCGTCGG CAAGCTGCTG GCGGGGATCG CGGCCGAGGT GATGAAGCCC ACCACCATGG AGCTGGGCGG CCATGCGCCG GTGATCGTGT TCGACGATGT CGACATCGAC ATGGTGGTCC GCATGACCGC CGCGTCGAAG TTCCGCAACG CCGGGCAGAT CTGCATCGCG CCGACCCGCT TCTACCTGCA TGACCGGATC CACGATGCGT TCGTGGCGCG CTTCGCGGAA GCGGCGCGGG CGCTGACGCT GGGCAACGGG CTCGATCCCG GGACGCGCAT GGGGCCGCTC GCCAATCCGC GCCGCGTCGT CGCCATGGAG GCGATGATCG GCGACGCGAT CGCCGGCGGT GCTGCGCTGC GCGCGGGCGG CGCGAAGGGC GACCTCCCCG GTGGCAATTT CTGGGAGGCG ACGGTGCTGA GCGACGTGCC GGACAGCGCG CGAATCATGA ACGAGGAACC GTTCGGGCCG GTGATCGCCA CCCAGCGTTT CGAAACGATC GAGGATGTCG CGGAGCGCGC CAATCGCCTG CCCTATGGCC TCGCCGCCTA TGCGTTCACG CGCTCCGCCG CGCAGGCGCA CCGGATCGGC GAGATGATCG AGGCCGGCAT GGTCGGGGTC AACTTTCCGG TGCTCACCGG GCCGGAAACG CCGTTCGGTG GCGTCAAGGA AAGCGGCCAT GGTTCCGACG GCGGCATCGA GGCGCTGCGC GGCTACCAGG TCACCAAATA TATCGCCCAA GGGTATCTGC CGGGATAA
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Protein sequence | MVDRHAYPAP RLFIDGEWID AGDRDTLPIA NPATGEAIGR LPVATRADLD RALDAARRGF VVWRAKTALE RAAILHRAAG LLRERADEIG RLSTIEQGKL VGESIAEAQA SADIFDWFAE DARRDYGRIV PSKQPAVRHL VVHEPIGPAA LFTPWNFPVT IPARKLAAAL AAGCSVVIKP AEETPMSCLE LARALDDAGL PKGVLNVVFG LPAEISDYLI RSPVIRKVSF TGSTGVGKLL AGIAAEVMKP TTMELGGHAP VIVFDDVDID MVVRMTAASK FRNAGQICIA PTRFYLHDRI HDAFVARFAE AARALTLGNG LDPGTRMGPL ANPRRVVAME AMIGDAIAGG AALRAGGAKG DLPGGNFWEA TVLSDVPDSA RIMNEEPFGP VIATQRFETI EDVAERANRL PYGLAAYAFT RSAAQAHRIG EMIEAGMVGV NFPVLTGPET PFGGVKESGH GSDGGIEALR GYQVTKYIAQ GYLPG
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