Gene Swit_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3063 
Symbol 
ID5199284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3361164 
End bp3362165 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content65% 
IMG OID640582612 
Productamidohydrolase 2 
Protein accessionYP_001263551 
Protein GI148555969 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.249503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCG ATTGCCATGG ACATGTGAGC GCGCCGGCCG AGCTCTGGGC CTATAAGGCG 
AACATCCTAT CGCACCGCGG CTCGCACGGC CGCGGCGGCG TCAAGGTCAG CGACGACGAC
CTGCGCCGTG CGGTCAACAA GGTGGAGATG GCGCCGTGCG GCCATCTCGA CATGCTCGCG
GCGCATGGCA CCGACATCCA GCTCATCTCG CCGCGCCCCT TCCAGATGAT GCCGAGTTTC
GAGCCGGCGC GCGCCGTCCA CTGGTTCACG GAGGAGACCA ACCAGATCAT CCATCGCCAG
ACCCGGCTCT TCCCCGACCG CTTCGTCGGC ATCGGCGGCC TGCCGCAGGT CGCGGGCGAG
CCGATCGAGA ACACGTTCGG CGAGCTGGAG CGTTGCATCC GCGACTATGG CTTCAAGGGC
GTCCTGCTCA ATCCGGACCC CTATGAGAAC ACGCGCAGCG ATCATCCGGG GCTGGGCGAC
CGCTATTGGT ATCCGCTCTA CGAGAAGCTC TGCGAACTCG ACGTGCCCGC GCACATCCAC
GCGACCGGAT CGCGCGCCGA TCGCTCGCCC TACAGCCTGC ACTTCATCAA CGAGGAGACG
ATCGCCGTCT TCAACCTCGT CAATTCGGAC GTGCTCGACG ACTTTCCCGA CCTGAAGATC
GTCGTCAGCC ATGGCGGCGG CGCCATCCCC TACCAGCTCG GGCGGTTCGA GGCGGGCTCG
ATCCGCCCGG GCATGAAGCG GAGCTTCTCC GAAGGGATGC GCAGGCTCTA TTACGACACC
GTCCTCTACA CCGAAGGCGC GCTGCGATTG CTGATCGAGA CGGTCGGCGT CGACCAGTGC
CTGTTCGGAT CGGAATGCCC CGGCGTCGGA TCGAAGACGC TGCCGGGCCA GGATCACACC
ATGGACCATA TCGCCCCGGT CATCGCCGGG TTCGACTGGC TGTCCGACGC CGACAAGCAG
AAGATCTTCG AGGGGAACGC CCGGAAGGTC TTCGGGATCT GA
 
Protein sequence
MIIDCHGHVS APAELWAYKA NILSHRGSHG RGGVKVSDDD LRRAVNKVEM APCGHLDMLA 
AHGTDIQLIS PRPFQMMPSF EPARAVHWFT EETNQIIHRQ TRLFPDRFVG IGGLPQVAGE
PIENTFGELE RCIRDYGFKG VLLNPDPYEN TRSDHPGLGD RYWYPLYEKL CELDVPAHIH
ATGSRADRSP YSLHFINEET IAVFNLVNSD VLDDFPDLKI VVSHGGGAIP YQLGRFEAGS
IRPGMKRSFS EGMRRLYYDT VLYTEGALRL LIETVGVDQC LFGSECPGVG SKTLPGQDHT
MDHIAPVIAG FDWLSDADKQ KIFEGNARKV FGI