Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3055 |
Symbol | |
ID | 5198924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3353287 |
End bp | 3354120 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640582604 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001263543 |
Protein GI | 148555961 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0115287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGAGC AGTTTGAAAG CAAGTTCATC GATTGTGATG GCATTCGTAC CCATTACATT GAAATGGGCG AGGGCGATCC GCTGGTGCTG GTCCATGGCG GCGGCGCGGG TGCCGACGGC CGGTCCAACT TCGCCGACAA TTTTCCGATC TTCGCCCGGC ATATGCGCGT CATCGCCTAT GACATGGTGG GCTTCGGCCA GACCGACGCG CCCGATCCTG CCGGTTTCGC CTATACCCAG GCCGCGCGCA CCGACCATCT GATCAGCTTC ATCAAGGCGC TGGGCCTTTC GAAGATCTGC CTGATCGGCA ACAGCATGGG CGGGACGACC GCCTGCGGCG CCGCGCTGAA GGCGCCGGAA CTGATCGACA GGCTCGTGCT GATGGGCGCG GCGGTGAACA TCTCCCCCGA CGACATGGTC GCCAATCGCG ACGACCTCGC GGCGGTGATG TCCTATGACG GCAGCGAGGA AGGGATGCGC AAGATCATCG CGGCGCTGAC CCATAGCTAC CAGCCGACCG ACGATATCGT CCATTACCGG CACGAGGCGT CGCTGCGGCC GACGACGACC GCGGCCTACA AGGCGACGAT GGGCTGGGCG AAGCAGAACG GCCTCTATTA CTCGCCCGAA CAGCTCGCTT CGCTGACGAT GCCGGTGCTG GTGCTCGGCG GCAAGAACGA CGTCATGGTG CCGGTCCGCA AGGTGATCGA CCAGATCCTG GCGATCCCGC AGGCGATCGG CCACGTCTTC CCGAACTGCG GCCATTGGGT GATGATCGAA TATCCCGAGG AATTCTGCAC CCAGACGCTC CACTTCTTCG GAAAGCTGGA TTGA
|
Protein sequence | MFEQFESKFI DCDGIRTHYI EMGEGDPLVL VHGGGAGADG RSNFADNFPI FARHMRVIAY DMVGFGQTDA PDPAGFAYTQ AARTDHLISF IKALGLSKIC LIGNSMGGTT ACGAALKAPE LIDRLVLMGA AVNISPDDMV ANRDDLAAVM SYDGSEEGMR KIIAALTHSY QPTDDIVHYR HEASLRPTTT AAYKATMGWA KQNGLYYSPE QLASLTMPVL VLGGKNDVMV PVRKVIDQIL AIPQAIGHVF PNCGHWVMIE YPEEFCTQTL HFFGKLD
|
| |