Gene Swit_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3042 
Symbol 
ID5198670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3337416 
End bp3337940 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID640582591 
ProductMarR family transcriptional regulator 
Protein accessionYP_001263530 
Protein GI148555948 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.125227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00142823 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTTTCC TTCCCCGCTG GCAAAGATCG GCTGTGTCCA CCCCCGCCCG CTCCCCTGCC 
GCCGATCGCG CCAAGCAGCT CGAGGCCCTG TACCAGCGGC CGGGCTTCCT GCTGCGCCGC
GCCCATCAGA TCGCCGTGTC GCTGTTCACG GAGGAAAGCG CCGCGTTCAA CATCACGACC
ACGCAATATG GCGTGCTGGT GATCCTGCGC GTCTATGACG ATCTCGATCA GATCGGGGTG
TCGAAGAAGG TCGGGCTCGA CCGCTCGACG ACGGGGCTGG TGATCCAGAA ACTCGAACGC
GAACGCCTCG TCGTCCGCCT CGCCGATCCC GCCGATGGCC GCCGCAAGAT CATCGTCCTG
ACGGCCAAGG GCGAGCGCCT GCTGAAGGAC CTGCAAGAGC CGGCCGCCCG CGCGCAGGAG
ATCGCCCTGT CGCCCTTCGA GCCGGAGGAG GCCGAGCAGT TCCTCCGCCT GCTCGACAAG
TTCGTCACCC ACTTCAACGA AAAGACGCGC GCGCCACTGC TCTGA
 
Protein sequence
MSFLPRWQRS AVSTPARSPA ADRAKQLEAL YQRPGFLLRR AHQIAVSLFT EESAAFNITT 
TQYGVLVILR VYDDLDQIGV SKKVGLDRST TGLVIQKLER ERLVVRLADP ADGRRKIIVL
TAKGERLLKD LQEPAARAQE IALSPFEPEE AEQFLRLLDK FVTHFNEKTR APLL