| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3020 |
|---|
| Symbol | |
|---|
| ID | 5200048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3306263 |
|---|
| End bp | 3307309 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640582569 |
|---|
| Product | malate/L-lactate dehydrogenase |
|---|
| Protein accession | YP_001263508 |
|---|
| Protein GI | 148555926 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2055] Malate/L-lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATA TCGCGACCAT CGCGGCGGAC GAACTGAGGC GCTATTCGGC GGACCTGCTG
GACAAGGCTG GCTTCGGCGA AGCCGAGGCG CGGGAGATGG CGGACCTTCT GGTATGGGCG
AACCAGCGCG GCGTCGACTC CCACGGCGTC CTTCGCATCC CCCGCTATGT CGAGATGCTC
GAGACCGGTC TCGTCCGCGC CGACTTCGCC TTTCGTGACG TCAGCCGGAC CGGCGCGGTC
TGCGTGCTCG ACGCGGGCAA GGCGCCGGGC GCGACGGCGA TGAACCGCGC CGTCGGGGAA
GCGGCGACGC TCGCCGCGCG CTTCGGCATC GGCTGGTGCG CGGTGCGCGA TACCTCGCAC
GCCGGGGCGA TCGGCTATTT CGTGCAGCAA TTGGCGGAAC GCGGGCTGGT CGGGCTGGCG
ATGACGGCGT CGAAGCCGCT GATGAGCTAT TTCGGCGCGA AGGGGGAGGC GCTGTCCACC
AATCCGCTAG CGATCGGCGT GCCGGTGCCC GATGGCGGCC GGCCGGTGAT CCTCGACATG
TCGATGGCCG CCGTGGCGCT GGGCAAGATC ATGGCGGCGA AGGACGCCGG GCGTCCGATT
CCGATCGGCT GGGGCGTGGA TGCGCAGGGC GCCGACACCA CCGACCCGCA CGCGGTCACG
GCGGTGCTGC CGATGGCCGG GGCGAAGGGA AGCGGCCTGT CGCTGATGAT CGAGATATTG
TGCAGCCTGC TCCCCGGCAA TCCGAGCATT GCGCCGGCGC TGGCCGGCGG CGACCCGGGC
GGGTTCAACG GTATGGTCCT GGCGATCGAT CCGGCGGCGT TCGGCGACCG CGACGGCTTC
CTCGCACAGG TCGGGGTGCT GGTCGACGCG ATCCATCGGC TGGAGCCGGT GCCGGGCGTC
TCGCGGGTGC TGCTCCCCGG CGAGCGCGGA CATGAGACCG AGGAGGCGCG CGGGGCGGGA
GGCATCCCGG TCGCTGCCGG CACCGTCAAG CGCCTCGGCG AACTGGCCGC CAGACTGGGC
GTGTCCGTTC CCACCGCTTT GCAATGA
|
|---|
| Protein sequence | MADIATIAAD ELRRYSADLL DKAGFGEAEA REMADLLVWA NQRGVDSHGV LRIPRYVEML
ETGLVRADFA FRDVSRTGAV CVLDAGKAPG ATAMNRAVGE AATLAARFGI GWCAVRDTSH
AGAIGYFVQQ LAERGLVGLA MTASKPLMSY FGAKGEALST NPLAIGVPVP DGGRPVILDM
SMAAVALGKI MAAKDAGRPI PIGWGVDAQG ADTTDPHAVT AVLPMAGAKG SGLSLMIEIL
CSLLPGNPSI APALAGGDPG GFNGMVLAID PAAFGDRDGF LAQVGVLVDA IHRLEPVPGV
SRVLLPGERG HETEEARGAG GIPVAAGTVK RLGELAARLG VSVPTALQ
|
|---|
| |