Gene Swit_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3009 
Symbol 
ID5197413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3296678 
End bp3297007 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content66% 
IMG OID640582558 
Productsmall multidrug resistance protein 
Protein accessionYP_001263498 
Protein GI148555916 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTATC TCTACCTCGC CATCGCGATC GTCGCCGAGG TGATCGGCAC CACCGCGCTC 
AAGCTGTCCG ACGGCTTCAC CCGCCCGCTT GCCTCAGTCG TCACCGCGCT CGGCTATGGC
ATCGCCTTCT TCTGCCTGTC GCTCACCCTG CGGACGATGC CGACCGGGGT CGCCTATGCG
ATCTGGTCGG GCGTCGGACT GGTGCTGATC ACCACCGTCG CCTGGCTGTT CCAGGGCCAG
AAGCTCGACA TCGCCGCGCT GATCGGCATG GCGCTGATCG TCGCCGGGGT GGCGGTGCTC
AACCTCTTCT CGACCTCGAT ATCGTCCTGA
 
Protein sequence
MAYLYLAIAI VAEVIGTTAL KLSDGFTRPL ASVVTALGYG IAFFCLSLTL RTMPTGVAYA 
IWSGVGLVLI TTVAWLFQGQ KLDIAALIGM ALIVAGVAVL NLFSTSISS