| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3005 |
|---|
| Symbol | metX |
|---|
| ID | 5197409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3292311 |
|---|
| End bp | 3293447 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640582554 |
|---|
| Product | homoserine O-acetyltransferase |
|---|
| Protein accession | YP_001263494 |
|---|
| Protein GI | 148555912 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2021] Homoserine acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCCA TGACCGACGA CAGCCGCTTC GGCCTCGCCC GTTCCGTGAC CCTGGCCGGC
CCGCTGCGGC TCGACGGCGG GGCGAGGCTG GCGCCGGTCG AGATCGCCTA TGAGACCTAT
GGCAGCCTCG ACGCCGACGG CGGCAACGCG GTCCTGATCT GCCACGCGCT GACCGGCGAC
CAACATGTCG CCTCGACCCA CCCGATCACC GGCAAGCCGG GCTGGTGGAC GCGAATGGTC
GGCGCCGGCA AGCCGATCGA CCCGGCGCGC CACTTCATCA TCTGCGCGAA CGTGCTGGGC
AGCTGCCTCG GCAGTTCGGG CCCCGGCACG ATCGATCCGG CGACCGGCGC CCCCTATGCG
ATGCGCTTCC CGGTGATCAC CATCCGCGAC ATGGTCCGCG CGCAGGCAAT ACTGCTCGAC
CATCTCGGCG TCGGCACGCT GGCGGCGGCG GTCGGCGGGT CGATGGGCGG GATGCAGGTG
CTGCAATGGG CCGCGACCTA TCCCGACCGG CTCCGCTCCG CCGTGGCGAT CGCCAGCACC
GCGCGCCACT CGGCGCAGAA CATCGCCTTC CACGAGGTCG GCCGCCAGGC GATCATGGCC
GATCCCAAAT GGGCCGGCGG CGACTATTAC GCCGCGGGCG ACCCGCCCGC CGCCGGTCTG
GCGGTCGCGC GGATGGCGGC GCACATCACC TATCTGTCCG AAGCCGGGCT GACCGAGAAA
TTCGGCCGCC GCCTGCAGGC GCGAGACGCC AAGAGCTTCG GCTTCGACGC CGATTTCCAG
ATCGAATCCT ATCTGCGCCA CCAGGGGATC AGCTTCGTCG ACCGGTTCGA CGCCAACTCC
TATCTCTACA TCACCCGGGC GATGGACTAT TTCGACCTGG CCGAGGAGCA TGGCGGGCTG
CTCGCGGGCG CCTTCCAGGG GGCGAAGCGG ACCCGCTTCT GCCTGGTCAG CTTCGACACC
GACTGGCTCT ACCCGACCGC CGAATCGCGC GCGATCGTCC ACGCGCTCAA CGCCGCCGGC
GCGCCGGTCA GCTTCGTCGA GCTGAGCTCG CCCTTCGGCC ACGACGCCTT CCTGCTCGAC
GTGCCCGAGC TCAACCGCGT GGTCGACGGC TTCCTCCGCG CGGGGGAGGA CCGGTGA
|
|---|
| Protein sequence | MAPMTDDSRF GLARSVTLAG PLRLDGGARL APVEIAYETY GSLDADGGNA VLICHALTGD
QHVASTHPIT GKPGWWTRMV GAGKPIDPAR HFIICANVLG SCLGSSGPGT IDPATGAPYA
MRFPVITIRD MVRAQAILLD HLGVGTLAAA VGGSMGGMQV LQWAATYPDR LRSAVAIAST
ARHSAQNIAF HEVGRQAIMA DPKWAGGDYY AAGDPPAAGL AVARMAAHIT YLSEAGLTEK
FGRRLQARDA KSFGFDADFQ IESYLRHQGI SFVDRFDANS YLYITRAMDY FDLAEEHGGL
LAGAFQGAKR TRFCLVSFDT DWLYPTAESR AIVHALNAAG APVSFVELSS PFGHDAFLLD
VPELNRVVDG FLRAGEDR
|
|---|
| |