| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2982 |
|---|
| Symbol | |
|---|
| ID | 5200746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3269858 |
|---|
| End bp | 3270235 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640582531 |
|---|
| Product | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 |
|---|
| Protein accession | YP_001263471 |
|---|
| Protein GI | 148555889 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.17098 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCAG TCGCCGCCGG ATATCTGCCG ATCCTGCTCT TCCTGGGCGT TGCCCTGGTG
CTGTCGAGCG CCTTCGTCTT CCTGCCGATG CTGGTCGGCC GGCTGACCGG CACCCATCAG
CCCAATCCCG AGAAGCTGGC CGAATATGAA TGCGGCTTCC CGGCGTTCGA GGACAGCCGC
GCCCAGTTCG ACGTGCGCTT CTACCTGATC GCCATCCTGT TCATCATCTT CGACCTCGAA
GCCGCCTTCC TCTATCCCTG GGCGGTGTCG CTCGGCGGGA TCGGGTTCGT CGGCTGGCTG
TCGATGATGA TCTTCCTGGT CGAGCTGGCC GTCGGCTTCA TCTATGCATG GAAGAAGGGA
GCGCTCGAAT GGGAGTGA
|
|---|
| Protein sequence | MASVAAGYLP ILLFLGVALV LSSAFVFLPM LVGRLTGTHQ PNPEKLAEYE CGFPAFEDSR
AQFDVRFYLI AILFIIFDLE AAFLYPWAVS LGGIGFVGWL SMMIFLVELA VGFIYAWKKG
ALEWE
|
|---|
| |