Gene Swit_2964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2964 
Symbol 
ID5197242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3249457 
End bp3250683 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content66% 
IMG OID640582513 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_001263453 
Protein GI148555871 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.151793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTAT TCGATCGCTT CGCCGGCCAT CTCTTCAAAC GCGGCGAAAT GACCATCATC 
ATGGCCGACG GCGACGTCCG CCGCTACGGC ACGCCCGATC CGGCGATCAA GCCCGTCACC
ATCCGCTTCG CCGACAAGGG CGTCACCGGC TTCATCGCGC GCAACCCGCA CCTCCACGCC
GCCGAGGCGT TCATGGACGG CCGGCTGGTG ATCGAGCAGG GCGACATCCG CGACCTGGTC
GACCTGGTCC GCGCCAACGG CAAGTGGGAG GAAGGCCGCG TCACCCTGCG CGGCACCTTC
GCCAACCTGG TCAGGGACCG GCTCCGCGCC GTGCTGGCCA GCGTCAACTG GGCGAGCCGG
TCGAAGGCCA ATGTCGCGCA TCACTATGAT CTCAACGACC GGCTCTACGA CCTCTTCCTC
GACGCCGACC GGCAATATAG CTGCGCCTAT TTCACCGATC CCGACAACGG CCTCGAACAG
GCGCAGGCCG ACAAGAAGGC GCATATCGCC GCCAAGCTGC ACCTCAAGCC GGGGCAGAGG
GTGCTCGACA TCGGCTGCGG CTGGGGCGGC ATGGCGCTCT ACCTGAACCG CGCCGCCGAC
GTCGATGTGC TCGGCATCAC CCTGTCGGAG GAGCAGCTCA AGGTCGCGCG CGAGCGGGCG
GCGGCGGCGG GCGTGTCCGA TCGGGTCCGC TTCGAGCTGA TCGACTATCG CGCGCTGGAG
GGGAAGTTCG ACCGGATCGT CTCGGTCGGC ATGTTCGAGC ATGTCGGCGT GCCGCAGTAC
GAGACCTTCT TCATGAAGTG CCGCGACCTG CTGGCCGACG ACGGGGTGAT GCTGCTCCAC
ACGATCGGGC GGCTCGGCGT GCCGGGCAAG ACCGACGCCT TCACCCTCAA ATATATCTTC
CCCGGCGGCT ACAACCCGGC GCTGTCGGAG ATCGTTTCGG CCAGCGAGCC GGCGCGGATG
ATCGTCGCCG ACGTCGAGCC GCTGCGGCTC CACTACGGGA TGACGCTCGA CCGCTGGTAC
GATCGCACCG TGGCGGCGAA GGACGCGATC GTCGCGCTCT ATGACGAGCG CTTCTTCCGC
ATGTGGACCT TCTACCTGGC CGGCGCGCGG GCGGCCTTCT ACCACGGCAA TCTGTGCAAT
TATCAGATCC AGTATGTCCG CGATCGCCGC GCGGTGCCAA TCACTCGTTC CTATATGGCG
GAAAAGGAAG CGGAGCTGCC GCGCTGA
 
Protein sequence
MSLFDRFAGH LFKRGEMTII MADGDVRRYG TPDPAIKPVT IRFADKGVTG FIARNPHLHA 
AEAFMDGRLV IEQGDIRDLV DLVRANGKWE EGRVTLRGTF ANLVRDRLRA VLASVNWASR
SKANVAHHYD LNDRLYDLFL DADRQYSCAY FTDPDNGLEQ AQADKKAHIA AKLHLKPGQR
VLDIGCGWGG MALYLNRAAD VDVLGITLSE EQLKVARERA AAAGVSDRVR FELIDYRALE
GKFDRIVSVG MFEHVGVPQY ETFFMKCRDL LADDGVMLLH TIGRLGVPGK TDAFTLKYIF
PGGYNPALSE IVSASEPARM IVADVEPLRL HYGMTLDRWY DRTVAAKDAI VALYDERFFR
MWTFYLAGAR AAFYHGNLCN YQIQYVRDRR AVPITRSYMA EKEAELPR