| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2961 |
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| Symbol | |
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| ID | 5197234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3246601 |
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| End bp | 3247770 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582511 |
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| Product | low temperature requirement A |
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| Protein accession | YP_001263451 |
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| Protein GI | 148555869 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4292] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.16347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC GGAAGAGGGC GATCCGGCCG ATGCATCCCC GCGACCCGGC CGAGCCGCAC
CGCGCCGCGA CCGCGCTCGA GCTGCTGTTC GACCTCGTCA CCGTGATCGC GATCGCCGCC
GCGGCCGAGG GGCTGCACCA TGCGATCGCC GAGGCGCATG CGGCCCAGGG CGTGCTGCGC
TTCGCGCTCG CCTTCTTCGC GATCTGGTGG GCGTGGATGA ACTTCACCTG GTTCGCCTCG
GCCTATGACA ATGACGATGC CGTCTTCCGG CTGCTGACGA TGGTGATCAT GGCGGGCTCG
CTGGCGCTGG CGGCCGGGGT CGACGGGCTG TTCCGCGCGC TCGACATCCA TCTGGTGGTC
GGCGGCTATG TCGTGATGCG GCTCGCCATG GTGCTGCTGT GGCTGCGCGC CGCCGGGGCC
GATCGGGCGC GGCGGACGAC CAATCTGCGC TATGCCGGCG GGATCGCGAT CGTCCAGCTC
TACTGGGTGC TGCTGATGGT GCTCGGATCG CCGGGTTCCA CCGCCTTCGT GCCGCTGATG
CTGCTCGGCT TCCTGTTCGA GCTCGGCGTG CCCGCCTTCG CCGAGCGCGC CACGACCACG
CCCTGGCACC GCCACCATAT CGTCGAGCGC TACGGCCTGC TGACCCTGAT CGTCCTCGGC
GAGATATTGC TCGGCGCGTC GCTCGCGCTC CAGGCGGCGG CGCGCGAGGC GTTCGACGCG
CGGCTCGTCC ATGTCGCGCT GTCGGCGCTG GTGATCACCT TCGCGATGTG GTGGCTCTAT
TTCTGCGAGG AGGAGCAGCT CCACGGCTCG GGCCTGCGCC GCGCGCTGCT GTGGGGCTAT
GGCCATCTCC CGATCTTCGC GGCGGGGGCG GCGGTCGGCG CGGGCTTCGC GGTGCTGGTC
GACATCGTCG CCGGCCACGC CCATGTCCCG TTGCGCGTCG GCGACATGGC GGTGGCGATC
CCGCTCGCGC TCTACATGGC CGGGCTCTGG CTGGTCCGCG ACCGCTTCGT CCTGGCCGGA
CCGGCGGGCC TCGTCCTGCC GCTGTTCGCG CTGGCGATCG TCGCGCTGCC CTTCGCCTTT
CCCGCGCTCG AGGCGATCGC CGCGCTCGCG GCGCTGGCGG CGGCGGTCCG CGCGCGGCTG
GGCCATCGCC ACCCCGCCCA CCATCGCTGA
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| Protein sequence | MTERKRAIRP MHPRDPAEPH RAATALELLF DLVTVIAIAA AAEGLHHAIA EAHAAQGVLR
FALAFFAIWW AWMNFTWFAS AYDNDDAVFR LLTMVIMAGS LALAAGVDGL FRALDIHLVV
GGYVVMRLAM VLLWLRAAGA DRARRTTNLR YAGGIAIVQL YWVLLMVLGS PGSTAFVPLM
LLGFLFELGV PAFAERATTT PWHRHHIVER YGLLTLIVLG EILLGASLAL QAAAREAFDA
RLVHVALSAL VITFAMWWLY FCEEEQLHGS GLRRALLWGY GHLPIFAAGA AVGAGFAVLV
DIVAGHAHVP LRVGDMAVAI PLALYMAGLW LVRDRFVLAG PAGLVLPLFA LAIVALPFAF
PALEAIAALA ALAAAVRARL GHRHPAHHR
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