Gene Swit_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2956 
Symbol 
ID5199824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3242889 
End bp3243350 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content70% 
IMG OID640582506 
ProductMarR family transcriptional regulator 
Protein accessionYP_001263446 
Protein GI148555864 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.119179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG ACGCTTCCGG GACGACGGGT CCCTTCGACA ATCTGCTGTG CTTCGCGGTC 
TATGCGGCGG GCCATGCGTT CAACCGCGTC TACAAGCCGC TGCTCGACCG GCTCGGCCTC
ACCTATCCCC AATATCTGGT GATCCTGGCG CTGCGCCATG CCGACGGGCA GACGGTCGGC
GCGCTCGGCG AGCATCTGTT CCTCGAATCG AACACGCTGA CCCCGCTGAT CAAGCGGCTC
GAAGCCGCCG GCTTCGTCCA GCGCCGCCGC GACGCCGCCG ACGAGCGGGT GGTGCGCGTC
CACCTGACCG ACAGAGGCCG CGCCGCCGGC GACGACGCAG CCTGCCTGCC GCCCGAATTG
TTCGACTCGA TCGGCCTGCC GGCCGGGGAG ATCGCGGCGC TCCAGCAGCG CCTGGTCGCG
CTCGGCGACA ATCTGCGCCG CAGCGCCGAG GAGCGCGGCT GA
 
Protein sequence
MTNDASGTTG PFDNLLCFAV YAAGHAFNRV YKPLLDRLGL TYPQYLVILA LRHADGQTVG 
ALGEHLFLES NTLTPLIKRL EAAGFVQRRR DAADERVVRV HLTDRGRAAG DDAACLPPEL
FDSIGLPAGE IAALQQRLVA LGDNLRRSAE ERG